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Description : RNA biosynthesis.transcriptional activation.PLATZ transcription factor
Gene families : OG0000197 (Archaeplastida) Phylogenetic Tree(s): OG0000197_tree ,
OG_05_0000880 (LandPlants) Phylogenetic Tree(s): OG_05_0000880_tree ,
OG_06_0001431 (SeedPlants) Phylogenetic Tree(s): OG_06_0001431_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01012125001 | |
| Cluster | HCCA: Cluster_50 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00008p00208550 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.PLATZ... | 0.05 | Archaeplastida | |
| AMTR_s00033p00166000 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.PLATZ... | 0.03 | Archaeplastida | |
| AMTR_s00059p00116150 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.PLATZ... | 0.02 | Archaeplastida | |
| GSVIVT01004782001 | No alias | RNA biosynthesis.transcriptional activation.PLATZ... | 0.05 | Archaeplastida | |
| GSVIVT01012869001 | No alias | RNA biosynthesis.transcriptional activation.PLATZ... | 0.03 | Archaeplastida | |
| Gb_29488 | No alias | transcription factor (PLATZ) | 0.03 | Archaeplastida | |
| Gb_32018 | No alias | transcription factor (PLATZ) | 0.02 | Archaeplastida | |
| LOC_Os02g07650.1 | No alias | transcription factor (PLATZ) | 0.1 | Archaeplastida | |
| MA_18612g0010 | No alias | transcription factor (PLATZ) | 0.04 | Archaeplastida | |
| Pp3c26_11480V3.1 | No alias | PLATZ transcription factor family protein | 0.05 | Archaeplastida | |
| Pp3c3_3180V3.1 | No alias | PLATZ transcription factor family protein | 0.05 | Archaeplastida | |
| Solyc01g091000.4.1 | No alias | transcription factor (PLATZ) | 0.04 | Archaeplastida | |
| Solyc02g068510.2.1 | No alias | transcription factor (PLATZ) | 0.09 | Archaeplastida | |
| Solyc08g005100.3.1 | No alias | transcription factor (PLATZ) | 0.03 | Archaeplastida | |
| Solyc08g076860.3.1 | No alias | transcription factor (PLATZ) | 0.06 | Archaeplastida | |
| Zm00001e007100_P003 | No alias | transcription factor (PLATZ) | 0.03 | Archaeplastida | |
| Zm00001e037743_P001 | No alias | transcription factor (PLATZ) | 0.04 | Archaeplastida | |
| Zm00001e041404_P001 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| CC | GO:0005634 | nucleus | IEP | Neighborhood |
| BP | GO:0007186 | G-protein coupled receptor signaling pathway | IEP | Neighborhood |
| CC | GO:0043226 | organelle | IEP | Neighborhood |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006734 | DUF597 | 59 | 130 |
| No external refs found! |