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  5. GSVIVT01012246001

GSVIVT01012246001


Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.YABBY transcription factor


Gene families : OG0000890 (Archaeplastida) Phylogenetic Tree(s): OG0000890_tree ,
OG_05_0010937 (LandPlants) Phylogenetic Tree(s): OG_05_0010937_tree ,
OG_06_0010891 (SeedPlants) Phylogenetic Tree(s): OG_06_0010891_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01012246001
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00165390 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
AMTR_s00047p00199030 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
AMTR_s00085p00032940 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AT1G23420 INO Plant-specific transcription factor YABBY family protein 0.1 Archaeplastida
AT1G69180 CRC Plant-specific transcription factor YABBY family protein 0.04 Archaeplastida
AT2G26580 YAB5 plant-specific transcription factor YABBY family protein 0.04 Archaeplastida
GSVIVT01037533001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
Gb_22423 No alias transcription factor (YABBY) 0.04 Archaeplastida
LOC_Os04g45330.1 No alias transcription factor (YABBY) 0.03 Archaeplastida
LOC_Os07g06620.2 No alias transcription factor (YABBY) 0.04 Archaeplastida
LOC_Os10g36420.1 No alias transcription factor (YABBY) 0.04 Archaeplastida
LOC_Os12g42610.1 No alias transcription factor (YABBY) 0.06 Archaeplastida
MA_10432332g0010 No alias transcription factor (YABBY) 0.02 Archaeplastida
MA_407206g0010 No alias transcription factor (YABBY) 0.05 Archaeplastida
Solyc01g010240.3.1 No alias transcription factor (YABBY) 0.08 Archaeplastida
Solyc01g091010.3.1 No alias transcription factor (YABBY) 0.06 Archaeplastida
Solyc05g005240.2.1 No alias transcription factor (YABBY) 0.05 Archaeplastida
Solyc06g073920.3.1 No alias transcription factor (YABBY) 0.03 Archaeplastida
Solyc11g071810.2.1 No alias transcription factor (YABBY) 0.04 Archaeplastida
Zm00001e000845_P005 No alias transcription factor (YABBY) 0.04 Archaeplastida
Zm00001e003268_P003 No alias transcription factor (YABBY) 0.03 Archaeplastida
Zm00001e012387_P001 No alias transcription factor (YABBY) 0.04 Archaeplastida
Zm00001e012388_P001 No alias transcription factor (YABBY) 0.05 Archaeplastida
Zm00001e017951_P002 No alias transcription factor (YABBY) 0.05 Archaeplastida
Zm00001e038717_P002 No alias transcription factor (YABBY) 0.05 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0007275 multicellular organism development IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
MF GO:0016289 CoA hydrolase activity IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR006780 YABBY 6 144
No external refs found!