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  5. GSVIVT01013085001

GSVIVT01013085001


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.G2-like GARP transcription factor


Gene families : OG0000027 (Archaeplastida) Phylogenetic Tree(s): OG0000027_tree ,
OG_05_0000101 (LandPlants) Phylogenetic Tree(s): OG_05_0000101_tree ,
OG_06_0000453 (SeedPlants) Phylogenetic Tree(s): OG_06_0000453_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01013085001
Cluster HCCA: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00096800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
AMTR_s00106p00040830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00131p00063460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
AT2G40260 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
AT4G17695 KAN3 Homeodomain-like superfamily protein 0.04 Archaeplastida
AT5G06800 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
GSVIVT01000606001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.09 Archaeplastida
LOC_Os06g45410.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
MA_138039g0010 No alias G2-like GARP transcription factor 0.02 Archaeplastida
MA_28188g0010 No alias G2-like GARP transcription factor 0.01 Archaeplastida
MA_8183372g0010 No alias G2-like GARP transcription factor 0.01 Archaeplastida
Mp3g04970.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Pp3c22_8210V3.1 No alias Homeodomain-like superfamily protein 0.14 Archaeplastida
Pp3c22_8217V3.1 No alias Homeodomain-like superfamily protein 0.01 Archaeplastida
Pp3c3_34700V3.1 No alias myb-like HTH transcriptional regulator family protein 0.01 Archaeplastida
Pp3c8_8720V3.1 No alias Homeodomain-like superfamily protein 0.09 Archaeplastida
Solyc02g076670.3.1 No alias Putative Myb family transcription factor At1g14600... 0.05 Archaeplastida
Solyc03g006150.2.1 No alias Putative Myb family transcription factor At1g14600... 0.01 Archaeplastida
Solyc12g006280.3.1 No alias Putative Myb family transcription factor At1g14600... 0.02 Archaeplastida
Zm00001e004125_P001 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Zm00001e005097_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e013758_P003 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e034056_P001 No alias G2-like GARP transcription factor 0.1 Archaeplastida
Zm00001e037131_P001 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Zm00001e037731_P001 No alias G2-like GARP transcription factor 0.01 Archaeplastida
Zm00001e040203_P001 No alias G2-like GARP transcription factor 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 160 211
No external refs found!