GSVIVT01013125001

Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter

Gene families : OG0000057 (Archaeplastida) Phylogenetic Tree(s): OG0000057_tree ,
OG_05_0000448 (LandPlants) Phylogenetic Tree(s): OG_05_0000448_tree ,
OG_06_0009042 (SeedPlants) Phylogenetic Tree(s): OG_06_0009042_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01013125001
Cluster	HCCA: Cluster_23

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00254310	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.06	Archaeplastida
AMTR_s00045p00109940	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
AMTR_s00055p00102180	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.05	Archaeplastida
AMTR_s00056p00132920	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
AMTR_s00090p00165440	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
AMTR_s00145p00075460	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
AT3G28360	PGP16	P-glycoprotein 16	0.04	Archaeplastida
AT3G62150	PGP21	P-glycoprotein 21	0.02	Archaeplastida
AT4G01820	PGP3, MDR3	P-glycoprotein 3	0.02	Archaeplastida
AT4G25960	PGP2	P-glycoprotein 2	0.07	Archaeplastida
GSVIVT01021365001	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
Gb_07563	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Gb_10211	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Gb_10216	No alias	subfamily ABCB transporter	0.02	Archaeplastida
Gb_13906	No alias	subfamily ABCB transporter	0.07	Archaeplastida
Gb_13908	No alias	ABC transporter B family member 10 OS=Arabidopsis...	0.06	Archaeplastida
Gb_32125	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Gb_33057	No alias	subfamily ABCB transporter	0.04	Archaeplastida
Gb_33058	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Gb_36497	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Gb_36503	No alias	serine carboxypeptidase. subfamily ABCB transporter	0.02	Archaeplastida
Gb_36862	No alias	subfamily ABCB transporter	0.05	Archaeplastida
LOC_Os01g18670.1	No alias	subfamily ABCB transporter	0.02	Archaeplastida
LOC_Os01g50080.1	No alias	subfamily ABCB transporter	0.03	Archaeplastida
LOC_Os02g46680.1	No alias	subfamily ABCB transporter	0.03	Archaeplastida
LOC_Os08g45030.1	No alias	subfamily ABCB transporter	0.04	Archaeplastida
MA_10432922g0010	No alias	subfamily ABCB transporter	0.04	Archaeplastida
MA_126766g0010	No alias	subfamily ABCB transporter	0.04	Archaeplastida
MA_6870g0010	No alias	subfamily ABCB transporter	0.03	Archaeplastida
MA_79399g0010	No alias	Putative multidrug resistance protein OS=Oryza sativa...	0.03	Archaeplastida
MA_93218g0020	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_934204g0010	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Mp2g11920.1	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Mp7g16060.1	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Pp3c1_31680V3.1	No alias	ABC transporter family protein	0.03	Archaeplastida
Pp3c1_7210V3.1	No alias	ATP binding cassette subfamily B19	0.02	Archaeplastida
Pp3c1_7215V3.1	No alias	ATP binding cassette subfamily B19	0.03	Archaeplastida
Pp3c21_18190V3.1	No alias	ATP binding cassette subfamily B19	0.03	Archaeplastida
Pp3c6_7260V3.1	No alias	ATP binding cassette subfamily B19	0.03	Archaeplastida
Smo230688	No alias	Solute transport.primary active transport.ABC...	0.08	Archaeplastida
Smo408755	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
Smo99885	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Solyc02g087410.4.1	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Solyc03g005860.4.1	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Solyc03g122070.3.1	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Solyc06g009280.1.1	No alias	subfamily ABCB transporter	0.04	Archaeplastida
Solyc08g076720.4.1	No alias	subfamily ABCB transporter	0.05	Archaeplastida
Solyc11g067300.2.1	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Solyc11g067310.3.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e006786_P002	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e008749_P001	No alias	subfamily ABCB transporter	0.03	Archaeplastida
Zm00001e020073_P001	No alias	subfamily ABCB transporter	0.04	Archaeplastida
Zm00001e023274_P001	No alias	subfamily ABCB transporter	0.04	Archaeplastida
Zm00001e025063_P001	No alias	subfamily ABCB transporter	0.08	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004519	endonuclease activity	IEP	Neighborhood
MF	GO:0004521	endoribonuclease activity	IEP	Neighborhood
MF	GO:0004540	ribonuclease activity	IEP	Neighborhood
CC	GO:0005575	cellular_component	IEP	Neighborhood
BP	GO:0006082	organic acid metabolic process	IEP	Neighborhood
BP	GO:0006629	lipid metabolic process	IEP	Neighborhood
BP	GO:0006631	fatty acid metabolic process	IEP	Neighborhood
BP	GO:0006633	fatty acid biosynthetic process	IEP	Neighborhood
BP	GO:0008037	cell recognition	IEP	Neighborhood
MF	GO:0008374	O-acyltransferase activity	IEP	Neighborhood
BP	GO:0008610	lipid biosynthetic process	IEP	Neighborhood
BP	GO:0009987	cellular process	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
BP	GO:0016053	organic acid biosynthetic process	IEP	Neighborhood
BP	GO:0016567	protein ubiquitination	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Neighborhood
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Neighborhood
BP	GO:0019752	carboxylic acid metabolic process	IEP	Neighborhood
BP	GO:0022414	reproductive process	IEP	Neighborhood
BP	GO:0032446	protein modification by small protein conjugation	IEP	Neighborhood
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	Neighborhood
BP	GO:0043436	oxoacid metabolic process	IEP	Neighborhood
BP	GO:0044237	cellular metabolic process	IEP	Neighborhood
BP	GO:0044238	primary metabolic process	IEP	Neighborhood
BP	GO:0044249	cellular biosynthetic process	IEP	Neighborhood
BP	GO:0044255	cellular lipid metabolic process	IEP	Neighborhood
BP	GO:0044281	small molecule metabolic process	IEP	Neighborhood
BP	GO:0044283	small molecule biosynthetic process	IEP	Neighborhood
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Neighborhood
BP	GO:0048544	recognition of pollen	IEP	Neighborhood
BP	GO:0071704	organic substance metabolic process	IEP	Neighborhood
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	Neighborhood
BP	GO:1901576	organic substance biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	45	312
IPR011527	ABC1_TM_dom	681	952
IPR003439	ABC_transporter-like	383	531
IPR003439	ABC_transporter-like	1018	1166

External Links

No external refs found!

GSVIVT01013125001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation