GSVIVT01013419001

Description : RNA biosynthesis.transcriptional activation.NAC transcription factor

Gene families : OG0000008 (Archaeplastida) Phylogenetic Tree(s): OG0000008_tree ,
OG_05_0000015 (LandPlants) Phylogenetic Tree(s): OG_05_0000015_tree ,
OG_06_0000025 (SeedPlants) Phylogenetic Tree(s): OG_06_0000025_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01013419001
Cluster	HCCA: Cluster_50

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00252470	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AMTR_s00010p00266320	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.06	Archaeplastida
AMTR_s00011p00251570	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
AMTR_s00025p00174590	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
AMTR_s00044p00058960	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AMTR_s00058p00136280	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AMTR_s00079p00099620	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AMTR_s00113p00077540	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AT1G12260	EMB2749,...	NAC 007	0.03	Archaeplastida
AT1G32510	NAC011, ANAC011	NAC domain containing protein 11	0.03	Archaeplastida
AT1G52890	ANAC019, NAC019	NAC domain containing protein 19	0.03	Archaeplastida
AT1G54330	ANAC020, NAC020	NAC domain containing protein 20	0.03	Archaeplastida
AT1G62700	VND5, ANAC026	Arabidopsis NAC domain containing protein 26	0.03	Archaeplastida
AT1G65910	anac028, NAC028	NAC domain containing protein 28	0.03	Archaeplastida
AT1G71930	ANAC030, VND7	vascular related NAC-domain protein 7	0.03	Archaeplastida
AT1G76420	ANAC031, NAC368, CUC3	NAC (No Apical Meristem) domain transcriptional...	0.11	Archaeplastida
AT1G79580	SMB, ANAC033	NAC (No Apical Meristem) domain transcriptional...	0.04	Archaeplastida
AT2G46770	NST1, ANAC043, EMB2301	NAC (No Apical Meristem) domain transcriptional...	0.03	Archaeplastida
AT3G12977	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Archaeplastida
AT3G15170	ANAC054, ATNAC1, CUC1	NAC (No Apical Meristem) domain transcriptional...	0.07	Archaeplastida
AT3G18400	anac058, NAC058	NAC domain containing protein 58	0.03	Archaeplastida
AT4G27410	RD26, ANAC072	NAC (No Apical Meristem) domain transcriptional...	0.03	Archaeplastida
AT4G28530	anac074, NAC074	NAC domain containing protein 74	0.03	Archaeplastida
AT4G36160	VND2, NAC076, ANAC076	NAC domain containing protein 76	0.03	Archaeplastida
AT5G24590	ANAC091, TIP	No description available	0.03	Archaeplastida
AT5G39820	NAC094, anac094	NAC domain containing protein 94	0.04	Archaeplastida
AT5G53950	ATCUC2, ANAC098, CUC2	NAC (No Apical Meristem) domain transcriptional...	0.11	Archaeplastida
GSVIVT01008291001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
GSVIVT01019670001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.05	Archaeplastida
GSVIVT01035554001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
Gb_27819	No alias	transcription factor (KNOX). transcription factor (NAC)	0.02	Archaeplastida
LOC_Os01g66120.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
LOC_Os03g04070.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os03g21030.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os04g45340.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os05g34600.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os06g01230.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os06g23650.1	No alias	transcription factor (NAC)	0.07	Archaeplastida
LOC_Os08g02160.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os08g02300.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os08g40030.1	No alias	transcription factor (NAC)	0.07	Archaeplastida
LOC_Os09g24560.1	No alias	transcription factor (NAC)	0.09	Archaeplastida
MA_109677g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_112054g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_138461g0010	No alias	transcription factor (NAC)	0.04	Archaeplastida
MA_21732g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_5017g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_95225g0010	No alias	transcription factor (NAC)	0.05	Archaeplastida
Mp6g02620.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Mp6g02670.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Pp3c16_19830V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Archaeplastida
Pp3c26_13950V3.1	No alias	NAC 007	0.04	Archaeplastida
Pp3c3_8880V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Archaeplastida
Pp3c4_11490V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Archaeplastida
Pp3c5_570V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Archaeplastida
Pp3c6_1310V3.1	No alias	NAC domain containing protein 70	0.03	Archaeplastida
Solyc01g102740.3.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc02g084350.3.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc02g088180.3.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc04g005610.3.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc05g007550.3.1	No alias	transcription factor (NAC)	0.05	Archaeplastida
Solyc06g063430.2.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc06g065410.3.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc07g062840.3.1	No alias	transcription factor (NAC)	0.18	Archaeplastida
Solyc08g008660.4.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc08g077110.4.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc11g017470.2.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc11g018660.2.1	No alias	transcription factor (NAC)	0.05	Archaeplastida
Solyc12g017400.3.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e003559_P003	No alias	transcription factor (NAC)	0.11	Archaeplastida
Zm00001e005094_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e012429_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e012982_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e019017_P002	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e022155_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e023108_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e029116_P001	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e029194_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e029404_P001	No alias	transcription factor (NAC)	0.09	Archaeplastida
Zm00001e029913_P001	No alias	transcription factor (NAC)	0.05	Archaeplastida
Zm00001e031694_P001	No alias	No annotation	0.03	Archaeplastida
Zm00001e031703_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e034574_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e034914_P001	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e036590_P001	No alias	transcription factor (NAC)	0.06	Archaeplastida
Zm00001e040938_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e041236_P002	No alias	transcription factor (NAC)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005634	nucleus	IEP	Neighborhood
BP	GO:0007186	G-protein coupled receptor signaling pathway	IEP	Neighborhood
CC	GO:0043227	membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Neighborhood
MF	GO:0043565	sequence-specific DNA binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	22	148

External Links

No external refs found!

GSVIVT01013419001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation