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  5. GSVIVT01013924001

GSVIVT01013924001


Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.ERF-type transcription factor


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0004644 (SeedPlants) Phylogenetic Tree(s): OG_06_0004644_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01013924001
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00264660 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
AMTR_s00007p00268280 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 Archaeplastida
AMTR_s00007p00268460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00009p00268560 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
AMTR_s00010p00194910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00010p00240320 evm_27.TU.AmTr_v1... Ethylene-responsive transcription factor FZP OS=Oryza... 0.03 Archaeplastida
AMTR_s00016p00238800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00040p00196580 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00111p00113030 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AT1G15360 WIN1, SHN1 Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT1G28160 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT4G16750 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT5G18450 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Cre16.g649433 No alias No description available 0.02 Archaeplastida
GSVIVT01001089001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01019519001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01019860001 No alias External stimuli response.temperature.ICE-CBF cold... 0.03 Archaeplastida
GSVIVT01031388001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01033416001 No alias External stimuli response.biotic... 0.02 Archaeplastida
GSVIVT01036388001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01036389001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
Gb_01211 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_03783 No alias transcription factor (ERF) 0.04 Archaeplastida
Gb_06407 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_07992 No alias Ethylene-responsive transcription factor RAP2-9... 0.02 Archaeplastida
Gb_12583 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_16683 No alias transcription factor (ERF) 0.04 Archaeplastida
Gb_24321 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_24328 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_26662 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_26667 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_26855 No alias transcription factor (DREB) 0.04 Archaeplastida
Gb_26856 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_26858 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_29220 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_29263 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_29359 No alias transcription factor (ERF). transcription factor (ERN1) 0.03 Archaeplastida
Gb_36992 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_41445 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_41836 No alias transcription factor (ERF) 0.04 Archaeplastida
LOC_Os01g58420.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os02g32040.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os02g43790.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os02g43970.1 No alias transcription factor (DREB) 0.05 Archaeplastida
LOC_Os02g45450.1 No alias Dehydration-responsive element-binding protein 1G... 0.03 Archaeplastida
LOC_Os02g55380.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os03g08500.2 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g22170.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os03g64260.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os04g44670.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os04g46410.1 No alias transcription factor (DREB) 0.04 Archaeplastida
LOC_Os04g46440.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os04g57340.1 No alias transcription factor (ERF) 0.04 Archaeplastida
LOC_Os05g41780.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os08g07700.1 No alias Ethylene-responsive transcription factor ERF087... 0.03 Archaeplastida
LOC_Os09g11480.2 No alias Ethylene-responsive transcription factor ERF112... 0.03 Archaeplastida
LOC_Os09g20350.1 No alias transcription factor (DREB) 0.02 Archaeplastida
LOC_Os09g39810.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os11g06770.2 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os11g13840.1 No alias transcription factor (DREB) 0.04 Archaeplastida
LOC_Os12g39330.1 No alias transcription factor (ERF). transcription factor (ERN1) 0.05 Archaeplastida
MA_100577g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_10082062g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_10242823g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_103035g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_10370681g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_10433310g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_10434101g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_10434489g0020 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_135279g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_17001g0020 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_179692g0020 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_3073g0010 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.02 Archaeplastida
MA_4032g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_4182g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_426919g0020 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_428433g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_436575g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_4929994g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_502153g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_6305g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_81029g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_914123g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_9565555g0010 No alias Ethylene-responsive transcription factor ERF016... 0.03 Archaeplastida
MA_959784g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_9785986g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
Mp1g20040.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Mp5g02590.1 No alias transcription factor (DREB) 0.04 Archaeplastida
Mp5g22160.1 No alias Ethylene-responsive transcription factor ERF112... 0.02 Archaeplastida
Mp7g09350.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Mp7g13760.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Mp7g17020.1 No alias Dehydration-responsive element-binding protein 2C... 0.02 Archaeplastida
Pp3c11_23290V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c11_24520V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c12_25330V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c16_13260V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c16_13280V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c16_4710V3.1 No alias ethylene response factor 7 0.03 Archaeplastida
Pp3c1_5010V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c1_7740V3.1 No alias ethylene responsive element binding factor 1 0.02 Archaeplastida
Pp3c26_13260V3.1 No alias ethylene responsive element binding factor 1 0.02 Archaeplastida
Pp3c26_1890V3.1 No alias erf domain protein 9 0.03 Archaeplastida
Pp3c27_6030V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c4_23930V3.1 No alias ethylene responsive element binding factor 1 0.02 Archaeplastida
Pp3c4_2530V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c5_810V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c6_16660V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c6_19350V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c6_20480V3.1 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
Pp3c6_28290V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c7_20200V3.1 No alias ethylene responsive element binding factor 2 0.03 Archaeplastida
Pp3c9_2020V3.1 No alias erf domain protein 9 0.02 Archaeplastida
Solyc01g005630.3.1 No alias transcription factor (ERF). transcription factor (ERN1) 0.04 Archaeplastida
Solyc01g090300.2.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc01g090345.1.1 No alias Ethylene-responsive transcription factor 13... 0.03 Archaeplastida
Solyc02g077360.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc03g005510.2.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc03g118190.4.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc04g051360.3.1 No alias transcription factor (ERF) 0.05 Archaeplastida
Solyc05g050790.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc05g052040.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc06g068360.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc08g078190.2.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc10g006130.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc10g078610.1.1 No alias transcription factor (ERF). transcription factor (ERN1) 0.03 Archaeplastida
Solyc11g042560.1.1 No alias transcription factor (DREB) 0.04 Archaeplastida
Zm00001e003800_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e014415_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e019567_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e023224_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e023759_P001 No alias Ethylene-responsive transcription factor ERF017... 0.03 Archaeplastida
Zm00001e023816_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e028920_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e030585_P001 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.03 Archaeplastida
Zm00001e031497_P001 No alias Ethylene-responsive transcription factor ABI4 OS=Oryza... 0.03 Archaeplastida
Zm00001e033072_P001 No alias transcription factor (ERF). transcription factor (ERN1) 0.04 Archaeplastida
Zm00001e034741_P001 No alias transcription factor (ERF). transcription factor (ERN1) 0.05 Archaeplastida
Zm00001e036201_P001 No alias Ethylene-responsive transcription factor ERF014... 0.03 Archaeplastida
Zm00001e037404_P001 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.04 Archaeplastida
Zm00001e037869_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e038525_P001 No alias Ethylene-responsive transcription factor ERF013... 0.03 Archaeplastida
Zm00001e041620_P002 No alias transcription factor (ERF) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0009891 positive regulation of biosynthetic process IEP Neighborhood
BP GO:0009893 positive regulation of metabolic process IEP Neighborhood
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010628 positive regulation of gene expression IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
MF GO:0030151 molybdenum ion binding IEP Neighborhood
BP GO:0031325 positive regulation of cellular metabolic process IEP Neighborhood
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0045893 positive regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048522 positive regulation of cellular process IEP Neighborhood
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051254 positive regulation of RNA metabolic process IEP Neighborhood
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Neighborhood
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 119 169
No external refs found!