GSVIVT01014245001

Description : Solute transport.channels.GLR ligand-gated cation channel

Gene families : OG0000085 (Archaeplastida) Phylogenetic Tree(s): OG0000085_tree ,
OG_05_0024538 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0023408 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01014245001
Cluster	HCCA: Cluster_227

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00178690	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.06	Archaeplastida
AMTR_s00019p00179020	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.02	Archaeplastida
AMTR_s00019p00180640	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.04	Archaeplastida
AMTR_s00019p00180760	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.04	Archaeplastida
AMTR_s00019p00184790	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.04	Archaeplastida
AMTR_s00021p00172130	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
AMTR_s00062p00055860	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
AT5G11210	GLR2.5, ATGLR2.5	glutamate receptor 2.5	0.03	Archaeplastida
AT5G48410	ATGLR1.3, GLR1.3	glutamate receptor 1.3	0.03	Archaeplastida
LOC_Os07g33790.1	No alias	ligand-gated cation channel (GLR)	0.01	Archaeplastida
MA_10428521g0010	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
MA_110963g0010	No alias	ligand-gated cation channel (GLR)	0.02	Archaeplastida
MA_23282g0010	No alias	ligand-gated cation channel (GLR)	0.01	Archaeplastida
MA_391859g0010	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
MA_88153g0010	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
MA_958834g0010	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
MA_9896648g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
Mp1g01040.1	No alias	ligand-gated cation channel (GLR)	0.02	Archaeplastida
Solyc06g063180.3.1	No alias	ligand-gated cation channel (GLR)	0.04	Archaeplastida
Solyc07g052400.3.1	No alias	ligand-gated cation channel (GLR)	0.02	Archaeplastida
Solyc08g006500.4.1	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
Zm00001e009847_P001	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0004888	transmembrane signaling receptor activity	None	Extended
MF	GO:0004970	ionotropic glutamate receptor activity	IEA	Interproscan
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	None	Extended
MF	GO:0005230	extracellular ligand-gated ion channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008066	glutamate receptor activity	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015276	ligand-gated ion channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022824	transmitter-gated ion channel activity	None	Extended
MF	GO:0022834	ligand-gated channel activity	None	Extended
MF	GO:0022835	transmitter-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022838	substrate-specific channel activity	None	Extended
MF	GO:0022839	ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030594	neurotransmitter receptor activity	None	Extended
MF	GO:0038023	signaling receptor activity	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004197	cysteine-type endopeptidase activity	IEP	Neighborhood
MF	GO:0004427	inorganic diphosphatase activity	IEP	Neighborhood
CC	GO:0005618	cell wall	IEP	Neighborhood
CC	GO:0005783	endoplasmic reticulum	IEP	Neighborhood
MF	GO:0008234	cysteine-type peptidase activity	IEP	Neighborhood
BP	GO:0010215	cellulose microfibril organization	IEP	Neighborhood
BP	GO:0016049	cell growth	IEP	Neighborhood
CC	GO:0016469	proton-transporting two-sector ATPase complex	IEP	Neighborhood
CC	GO:0016471	vacuolar proton-transporting V-type ATPase complex	IEP	Neighborhood
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Neighborhood
BP	GO:0030198	extracellular matrix organization	IEP	Neighborhood
CC	GO:0030312	external encapsulating structure	IEP	Neighborhood
CC	GO:0031225	anchored component of membrane	IEP	Neighborhood
CC	GO:0031226	intrinsic component of plasma membrane	IEP	Neighborhood
CC	GO:0033176	proton-transporting V-type ATPase complex	IEP	Neighborhood
BP	GO:0040007	growth	IEP	Neighborhood
BP	GO:0043062	extracellular structure organization	IEP	Neighborhood
CC	GO:0044437	vacuolar part	IEP	Neighborhood
CC	GO:0044459	plasma membrane part	IEP	Neighborhood
CC	GO:0044464	cell part	IEP	Neighborhood
CC	GO:0046658	anchored component of plasma membrane	IEP	Neighborhood
CC	GO:0048046	apoplast	IEP	Neighborhood
BP	GO:0050790	regulation of catalytic activity	IEP	Neighborhood
BP	GO:0065009	regulation of molecular function	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001320	Iontro_rcpt	341	493
IPR001828	ANF_lig-bd_rcpt	4	170
IPR001828	ANF_lig-bd_rcpt	594	919
IPR001638	Solute-binding_3/MltF_N	243	509
IPR001638	Solute-binding_3/MltF_N	997	1307
IPR001320	Iontro_rcpt	1308	1341

External Links

No external refs found!

GSVIVT01014245001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation