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  5. GSVIVT01014274001

GSVIVT01014274001


Description : DNA damage response.BRCA1–BARD1 DNA-damage response heterodimer.BRCA1|BARD1 component


Gene families : OG0001589 (Archaeplastida) Phylogenetic Tree(s): OG0001589_tree ,
OG_05_0007251 (LandPlants) Phylogenetic Tree(s): OG_05_0007251_tree ,
OG_06_0008578 (SeedPlants) Phylogenetic Tree(s): OG_06_0008578_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01014274001
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00084950 evm_27.TU.AmTr_v1... ATPase family AAA domain-containing protein At1g05910... 0.03 Archaeplastida
AT1G05910 No alias cell division cycle protein 48-related / CDC48-related 0.05 Archaeplastida
AT3G15120 No alias P-loop containing nucleoside triphosphate hydrolases... 0.08 Archaeplastida
Cpa|evm.model.tig00001042.14 No alias ATPase family AAA domain-containing protein At1g05910... 0.02 Archaeplastida
Cre01.g038151 No alias ATPase family AAA domain-containing protein At1g05910... 0.01 Archaeplastida
GSVIVT01010750001 No alias ATPase family AAA domain-containing protein At1g05910... 0.04 Archaeplastida
Gb_05160 No alias ATPase family AAA domain-containing protein At1g05910... 0.03 Archaeplastida
Gb_11471 No alias component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... 0.03 Archaeplastida
LOC_Os01g47800.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os09g33980.1 No alias ATPase family AAA domain-containing protein At1g05910... 0.04 Archaeplastida
MA_10425878g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10425878g0020 No alias ATPase family AAA domain-containing protein At1g05910... 0.03 Archaeplastida
MA_10432357g0010 No alias ATPase family AAA domain-containing protein At1g05910... 0.09 Archaeplastida
Mp1g06470.1 No alias component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... 0.03 Archaeplastida
Mp2g00420.1 No alias ATPase family AAA domain-containing protein At1g05910... 0.02 Archaeplastida
Pp3c23_2940V3.1 No alias cell division cycle protein 48-related / CDC48-related 0.07 Archaeplastida
Pp3c8_5410V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.08 Archaeplastida
Smo170139 No alias ATPase family AAA domain-containing protein At1g05910... 0.06 Archaeplastida
Solyc04g076180.4.1 No alias no hits & (original description: none) 0.09 Archaeplastida
Solyc07g062770.2.1 No alias component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... 0.1 Archaeplastida
Zm00001e020208_P001 No alias no hits & (original description: none) 0.09 Archaeplastida
Zm00001e034695_P003 No alias ATPase family AAA domain-containing protein At1g05910... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 691 826
No external refs found!