AMTR_s00038p00234600 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00038.235

Description : Phytohormones.signalling peptides.CRP (cysteine-rich-peptide) category.EPF/EPFL family.EPF/EPFL precursor polypeptide


Gene families : OG0000526 (Archaeplastida) Phylogenetic Tree(s): OG0000526_tree ,
OG_05_0000287 (LandPlants) Phylogenetic Tree(s): OG_05_0000287_tree ,
OG_06_0001009 (SeedPlants) Phylogenetic Tree(s): OG_06_0001009_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00038p00234600
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AT1G80133 No alias unknown protein; LOCATED IN: endomembrane system; Has... 0.04 Archaeplastida
AT2G30370 EPFL6, CHAL allergen-related 0.06 Archaeplastida
AT3G13898 No alias unknown protein; LOCATED IN: endomembrane system; BEST... 0.04 Archaeplastida
AT3G22820 No alias allergen-related 0.02 Archaeplastida
AT4G14723 No alias BEST Arabidopsis thaliana protein match is:... 0.04 Archaeplastida
AT4G37810 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 Archaeplastida
AT5G10310 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.06 Archaeplastida
GSVIVT01006628001 No alias Phytohormones.signalling peptides.CRP... 0.03 Archaeplastida
GSVIVT01015177001 No alias Phytohormones.signalling peptides.CRP... 0.04 Archaeplastida
GSVIVT01018037001 No alias Phytohormones.signalling peptides.CRP... 0.08 Archaeplastida
Gb_05485 No alias EPF/EPFL precursor polypeptide 0.03 Archaeplastida
Gb_17311 No alias EPF/EPFL precursor polypeptide 0.04 Archaeplastida
Gb_22501 No alias EPF/EPFL precursor polypeptide 0.03 Archaeplastida
Gb_30138 No alias EPF/EPFL precursor polypeptide 0.03 Archaeplastida
Gb_33041 No alias EPF/EPFL precursor polypeptide 0.03 Archaeplastida
Gb_39245 No alias EPF/EPFL precursor polypeptide 0.05 Archaeplastida
LOC_Os01g60900.1 No alias EPF/EPFL precursor polypeptide 0.05 Archaeplastida
LOC_Os02g51950.1 No alias EPF/EPFL precursor polypeptide 0.02 Archaeplastida
LOC_Os03g06610.1 No alias EPF/EPFL precursor polypeptide 0.05 Archaeplastida
LOC_Os03g46930.1 No alias EPF/EPFL precursor polypeptide 0.14 Archaeplastida
LOC_Os03g51660.1 No alias EPF/EPFL precursor polypeptide 0.02 Archaeplastida
LOC_Os05g39880.1 No alias EPF/EPFL precursor polypeptide 0.04 Archaeplastida
LOC_Os07g04020.1 No alias EPF/EPFL precursor polypeptide 0.1 Archaeplastida
LOC_Os08g37890.1 No alias EPF/EPFL precursor polypeptide 0.02 Archaeplastida
LOC_Os11g37190.1 No alias EPF/EPFL precursor polypeptide 0.04 Archaeplastida
MA_105123g0010 No alias EPF/EPFL precursor polypeptide 0.04 Archaeplastida
MA_110556g0010 No alias EPF/EPFL precursor polypeptide 0.06 Archaeplastida
MA_112390g0010 No alias EPF/EPFL precursor polypeptide 0.04 Archaeplastida
MA_184852g0010 No alias EPF/EPFL precursor polypeptide 0.04 Archaeplastida
MA_22430g0010 No alias EPF/EPFL precursor polypeptide 0.02 Archaeplastida
MA_38686g0020 No alias EPF/EPFL precursor polypeptide 0.05 Archaeplastida
MA_79690g0010 No alias EPF/EPFL precursor polypeptide 0.03 Archaeplastida
Mp4g23980.1 No alias EPF/EPFL precursor polypeptide 0.07 Archaeplastida
Pp3c16_1430V3.1 No alias allergen-related 0.04 Archaeplastida
Pp3c1_26030V3.1 No alias allergen-related 0.05 Archaeplastida
Pp3c2_13490V3.1 No alias allergen-related 0.03 Archaeplastida
Pp3c5_11260V3.1 No alias allergen-related 0.06 Archaeplastida
Pp3c6_12270V3.1 No alias allergen-related 0.02 Archaeplastida
Solyc02g091910.2.1 No alias EPF/EPFL precursor polypeptide 0.07 Archaeplastida
Solyc04g077170.3.1 No alias EPF/EPFL precursor polypeptide 0.07 Archaeplastida
Solyc05g051545.1.1 No alias EPF/EPFL precursor polypeptide 0.01 Archaeplastida
Solyc06g007460.3.1 No alias EPF/EPFL precursor polypeptide 0.04 Archaeplastida
Solyc06g053970.4.1 No alias EPF/EPFL precursor polypeptide 0.02 Archaeplastida
Solyc07g008205.1.1 No alias EPF/EPFL precursor polypeptide 0.06 Archaeplastida
Solyc09g082620.3.1 No alias EPF/EPFL precursor polypeptide 0.07 Archaeplastida
Solyc11g009040.3.1 No alias No annotation 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!