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Description : Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana
Gene families : OG0000652 (Archaeplastida) Phylogenetic Tree(s): OG0000652_tree ,
OG_05_0004500 (LandPlants) Phylogenetic Tree(s): OG_05_0004500_tree ,
OG_06_0004367 (SeedPlants) Phylogenetic Tree(s): OG_06_0004367_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01014679001 | |
| Cluster | HCCA: Cluster_181 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00025p00188660 | evm_27.TU.AmTr_v1... | RNA biosynthesis.RNA polymerase II-dependent... | 0.05 | Archaeplastida | |
| AT1G16800 | No alias | P-loop containing nucleoside triphosphate hydrolases... | 0.12 | Archaeplastida | |
| AT2G19120 | No alias | P-loop containing nucleoside triphosphate hydrolases... | 0.06 | Archaeplastida | |
| Cre06.g263800 | No alias | Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana | 0.06 | Archaeplastida | |
| Gb_01813 | No alias | Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... | 0.05 | Archaeplastida | |
| Gb_33974 | No alias | helicase (SEN1) | 0.04 | Archaeplastida | |
| MA_208026g0010 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| Mp5g19520.1 | No alias | helicase (SEN1) | 0.04 | Archaeplastida | |
| Mp7g11100.1 | No alias | Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
| Smo444379 | No alias | RNA biosynthesis.RNA polymerase II-dependent... | 0.06 | Archaeplastida | |
| Solyc01g104640.3.1 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Solyc03g124010.3.1 | No alias | helicase (SEN1) | 0.06 | Archaeplastida | |
| Solyc04g072840.3.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Zm00001e012042_P001 | No alias | Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... | 0.09 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0003690 | double-stranded DNA binding | IEP | Neighborhood |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Neighborhood |
| MF | GO:0004386 | helicase activity | IEP | Neighborhood |
| MF | GO:0004540 | ribonuclease activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| CC | GO:0005643 | nuclear pore | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006298 | mismatch repair | IEP | Neighborhood |
| BP | GO:0006351 | transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006397 | mRNA processing | IEP | Neighborhood |
| BP | GO:0006405 | RNA export from nucleus | IEP | Neighborhood |
| BP | GO:0006406 | mRNA export from nucleus | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| MF | GO:0008536 | Ran GTPase binding | IEP | Neighborhood |
| BP | GO:0009058 | biosynthetic process | IEP | Neighborhood |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
| BP | GO:0016579 | protein deubiquitination | IEP | Neighborhood |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Neighborhood |
| BP | GO:0016973 | poly(A)+ mRNA export from nucleus | IEP | Neighborhood |
| MF | GO:0017016 | Ras GTPase binding | IEP | Neighborhood |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Neighborhood |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Neighborhood |
| MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Neighborhood |
| MF | GO:0030983 | mismatched DNA binding | IEP | Neighborhood |
| MF | GO:0031267 | small GTPase binding | IEP | Neighborhood |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Neighborhood |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| MF | GO:0036459 | thiol-dependent ubiquitinyl hydrolase activity | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| BP | GO:0046907 | intracellular transport | IEP | Neighborhood |
| BP | GO:0050657 | nucleic acid transport | IEP | Neighborhood |
| BP | GO:0050658 | RNA transport | IEP | Neighborhood |
| MF | GO:0051020 | GTPase binding | IEP | Neighborhood |
| BP | GO:0051028 | mRNA transport | IEP | Neighborhood |
| BP | GO:0051168 | nuclear export | IEP | Neighborhood |
| BP | GO:0051169 | nuclear transport | IEP | Neighborhood |
| BP | GO:0051236 | establishment of RNA localization | IEP | Neighborhood |
| BP | GO:0051641 | cellular localization | IEP | Neighborhood |
| BP | GO:0051649 | establishment of localization in cell | IEP | Neighborhood |
| BP | GO:0070646 | protein modification by small protein removal | IEP | Neighborhood |
| BP | GO:0071702 | organic substance transport | IEP | Neighborhood |
| BP | GO:0071705 | nitrogen compound transport | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Neighborhood |
| MF | GO:0097747 | RNA polymerase activity | IEP | Neighborhood |
| MF | GO:0101005 | ubiquitinyl hydrolase activity | IEP | Neighborhood |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |