Coexpression cluster: Cluster_181 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016070 RNA metabolic process 13.75% (11/80) 3.55 0.0 0.0
GO:0090304 nucleic acid metabolic process 13.75% (11/80) 3.09 0.0 6e-06
GO:0006139 nucleobase-containing compound metabolic process 13.75% (11/80) 2.75 1e-06 4.1e-05
GO:0140098 catalytic activity, acting on RNA 8.75% (7/80) 3.75 1e-06 4.1e-05
GO:0006725 cellular aromatic compound metabolic process 13.75% (11/80) 2.6 2e-06 5.8e-05
GO:1901360 organic cyclic compound metabolic process 13.75% (11/80) 2.55 3e-06 6.7e-05
GO:0046483 heterocycle metabolic process 13.75% (11/80) 2.6 2e-06 6.8e-05
GO:0006399 tRNA metabolic process 6.25% (5/80) 4.1 1.1e-05 0.000249
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 5.0% (4/80) 4.75 1.5e-05 0.000298
GO:0097747 RNA polymerase activity 5.0% (4/80) 4.61 2.2e-05 0.000359
GO:0034062 5'-3' RNA polymerase activity 5.0% (4/80) 4.61 2.2e-05 0.000359
GO:0034660 ncRNA metabolic process 6.25% (5/80) 3.84 2.7e-05 0.000399
GO:0034641 cellular nitrogen compound metabolic process 13.75% (11/80) 2.16 3.3e-05 0.00045
GO:0006351 transcription, DNA-templated 5.0% (4/80) 4.21 6.6e-05 0.000779
GO:0097659 nucleic acid-templated transcription 5.0% (4/80) 4.21 6.6e-05 0.000779
GO:0002097 tRNA wobble base modification 2.5% (2/80) 7.04 9.1e-05 0.001007
GO:0016779 nucleotidyltransferase activity 5.0% (4/80) 3.75 0.000229 0.002267
GO:0005488 binding 40.0% (32/80) 0.86 0.000217 0.002271
GO:0032774 RNA biosynthetic process 5.0% (4/80) 3.62 0.000321 0.003005
GO:0006396 RNA processing 5.0% (4/80) 3.54 0.000395 0.003514
GO:0006400 tRNA modification 2.5% (2/80) 5.9 0.000492 0.00417
GO:0004812 aminoacyl-tRNA ligase activity 3.75% (3/80) 4.04 0.000814 0.005799
GO:0016875 ligase activity, forming carbon-oxygen bonds 3.75% (3/80) 4.04 0.000814 0.005799
GO:0043038 amino acid activation 3.75% (3/80) 4.07 0.000775 0.006001
GO:0043039 tRNA aminoacylation 3.75% (3/80) 4.07 0.000775 0.006001
GO:0003676 nucleic acid binding 13.75% (11/80) 1.6 0.000961 0.006577
GO:0034654 nucleobase-containing compound biosynthetic process 5.0% (4/80) 2.84 0.002409 0.015314
GO:0005515 protein binding 15.0% (12/80) 1.34 0.002527 0.01551
GO:0140101 catalytic activity, acting on a tRNA 3.75% (3/80) 3.51 0.002379 0.015682
GO:0016553 base conversion or substitution editing 1.25% (1/80) 8.36 0.003037 0.016379
GO:0008251 tRNA-specific adenosine deaminase activity 1.25% (1/80) 8.36 0.003037 0.016379
GO:0002100 tRNA wobble adenosine to inosine editing 1.25% (1/80) 8.36 0.003037 0.016379
GO:0006382 adenosine to inosine editing 1.25% (1/80) 8.36 0.003037 0.016379
GO:0006397 mRNA processing 2.5% (2/80) 4.56 0.00327 0.017119
GO:0016874 ligase activity 3.75% (3/80) 3.26 0.003833 0.019495
GO:0043170 macromolecule metabolic process 17.5% (14/80) 1.12 0.004528 0.021785
GO:0009451 RNA modification 2.5% (2/80) 4.32 0.004523 0.022364
GO:0016071 mRNA metabolic process 2.5% (2/80) 4.28 0.004796 0.022467
GO:0019438 aromatic compound biosynthetic process 5.0% (4/80) 2.55 0.004935 0.022526
GO:0018130 heterocycle biosynthetic process 5.0% (4/80) 2.51 0.005413 0.024087
GO:0008033 tRNA processing 2.5% (2/80) 4.15 0.005661 0.024575
GO:0004000 adenosine deaminase activity 1.25% (1/80) 7.36 0.006064 0.0257
GO:0019899 enzyme binding 2.5% (2/80) 4.08 0.006273 0.025969
GO:0006520 cellular amino acid metabolic process 3.75% (3/80) 2.99 0.006423 0.025985
GO:1901362 organic cyclic compound biosynthetic process 5.0% (4/80) 2.37 0.00763 0.030182
GO:0005524 ATP binding 11.25% (9/80) 1.37 0.00795 0.030763
GO:0051170 import into nucleus 1.25% (1/80) 6.78 0.009082 0.031699
GO:0006606 protein import into nucleus 1.25% (1/80) 6.78 0.009082 0.031699
GO:0034504 protein localization to nucleus 1.25% (1/80) 6.78 0.009082 0.031699
GO:0006807 nitrogen compound metabolic process 17.5% (14/80) 1.01 0.008803 0.033339
GO:0006418 tRNA aminoacylation for protein translation 2.5% (2/80) 3.81 0.00901 0.03341
GO:0044237 cellular metabolic process 17.5% (14/80) 0.97 0.011111 0.038034
GO:0008144 drug binding 11.25% (9/80) 1.27 0.012142 0.039297
GO:0033588 Elongator holoenzyme complex 1.25% (1/80) 6.36 0.012091 0.039857
GO:0002098 tRNA wobble uridine modification 1.25% (1/80) 6.36 0.012091 0.039857
GO:0034470 ncRNA processing 2.5% (2/80) 3.56 0.012611 0.040086
GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines 1.25% (1/80) 6.04 0.015092 0.046316
GO:0043015 gamma-tubulin binding 1.25% (1/80) 6.04 0.015092 0.046316
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_11 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_99 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_114 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_139 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_192 0.102 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_220 0.036 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_221 0.082 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_252 0.029 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_262 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_132 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_172 0.039 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_190 0.029 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_194 0.026 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_227 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_228 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_233 0.035 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_246 0.029 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_249 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_253 0.029 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_259 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_264 0.03 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_267 0.023 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_83 0.022 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_144 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_4 0.027 Archaeplastida Compare
Gingko biloba HCCA Cluster_41 0.037 Archaeplastida Compare
Gingko biloba HCCA Cluster_116 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_131 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_175 0.063 Archaeplastida Compare
Gingko biloba HCCA Cluster_212 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_241 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_256 0.025 Archaeplastida Compare
Gingko biloba HCCA Cluster_265 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_289 0.047 Archaeplastida Compare
Gingko biloba HCCA Cluster_328 0.029 Archaeplastida Compare
Zea mays HCCA Cluster_6 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_56 0.04 Archaeplastida Compare
Zea mays HCCA Cluster_61 0.031 Archaeplastida Compare
Zea mays HCCA Cluster_103 0.031 Archaeplastida Compare
Zea mays HCCA Cluster_110 0.038 Archaeplastida Compare
Zea mays HCCA Cluster_216 0.073 Archaeplastida Compare
Zea mays HCCA Cluster_261 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_270 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_285 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_290 0.062 Archaeplastida Compare
Zea mays HCCA Cluster_322 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_341 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_352 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_358 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_363 0.047 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_16 0.028 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_24 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_61 0.038 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_91 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_110 0.027 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_153 0.04 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_176 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_8 0.034 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_11 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_111 0.034 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_146 0.037 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_154 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_167 0.049 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_169 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_235 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_237 0.041 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_263 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_272 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_286 0.032 Archaeplastida Compare
Picea abies HCCA Cluster_32 0.039 Archaeplastida Compare
Picea abies HCCA Cluster_97 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_220 0.048 Archaeplastida Compare
Picea abies HCCA Cluster_238 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_256 0.047 Archaeplastida Compare
Picea abies HCCA Cluster_274 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_277 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_290 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_380 0.031 Archaeplastida Compare
Picea abies HCCA Cluster_393 0.047 Archaeplastida Compare
Picea abies HCCA Cluster_403 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_435 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_478 0.034 Archaeplastida Compare
Oryza sativa HCCA Cluster_40 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_49 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_94 0.04 Archaeplastida Compare
Oryza sativa HCCA Cluster_141 0.071 Archaeplastida Compare
Oryza sativa HCCA Cluster_174 0.029 Archaeplastida Compare
Oryza sativa HCCA Cluster_219 0.03 Archaeplastida Compare
Oryza sativa HCCA Cluster_273 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_293 0.032 Archaeplastida Compare
Oryza sativa HCCA Cluster_297 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_312 0.031 Archaeplastida Compare
Oryza sativa HCCA Cluster_316 0.035 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_75 0.066 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_82 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_108 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_141 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_35 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_105 0.045 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_118 0.034 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_131 0.04 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_140 0.034 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_173 0.031 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_182 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_202 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_209 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_233 0.029 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_243 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_259 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_260 0.032 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_275 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_277 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_92 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_164 0.026 Archaeplastida Compare
Vitis vinifera HCCA Cluster_233 0.029 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_60 0.04 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_62 0.036 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_125 0.026 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_134 0.021 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_152 0.023 Archaeplastida Compare
Sequences (80) (download table)

InterPro Domains

GO Terms

Family Terms