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  5. GSVIVT01015223001

GSVIVT01015223001


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor


Gene families : OG0000067 (Archaeplastida) Phylogenetic Tree(s): OG0000067_tree ,
OG_05_0000426 (LandPlants) Phylogenetic Tree(s): OG_05_0000426_tree ,
OG_06_0000467 (SeedPlants) Phylogenetic Tree(s): OG_06_0000467_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01015223001
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00247840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00045p00096080 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00056p00127760 evm_27.TU.AmTr_v1... Transcription factor KUA1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G19000 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
AT4G09450 No alias Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
AT5G01200 No alias Duplicated homeodomain-like superfamily protein 0.04 Archaeplastida
Cre03.g198800 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01009723001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01020132001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01024794001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_00887 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Gb_38078 No alias transcription factor (MYB-related) 0.05 Archaeplastida
LOC_Os01g04930.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
LOC_Os01g09640.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os05g10690.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os05g37730.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os08g04840.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
MA_41803g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_6532729g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc03g113620.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e017388_P001 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e019190_P001 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e019254_P001 No alias transcription factor (MYB-related) 0.06 Archaeplastida
Zm00001e025784_P001 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e028729_P001 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e031738_P001 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Zm00001e042486_P001 No alias transcription factor (MYB-related) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0008272 sulfate transport IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 103 147
No external refs found!