GSVIVT01015472001

Description : Lipid metabolism.fatty acid synthesis.fatty acid desaturation and elongation.fatty acid elongation.fatty acid elongation complex.KCS 3-ketoacyl-CoA synthase

Gene families : OG0000123 (Archaeplastida) Phylogenetic Tree(s): OG0000123_tree ,
OG_05_0000139 (LandPlants) Phylogenetic Tree(s): OG_05_0000139_tree ,
OG_06_0000189 (SeedPlants) Phylogenetic Tree(s): OG_06_0000189_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01015472001
Cluster	HCCA: Cluster_112

Target	Alias	Description	ECC score	Gene Family Method
AT1G19440	KCS4	3-ketoacyl-CoA synthase 4	0.02	Archaeplastida
AT1G25450	KCS5, CER60	3-ketoacyl-CoA synthase 5	0.03	Archaeplastida
AT2G16280	KCS9	3-ketoacyl-CoA synthase 9	0.02	Archaeplastida
AT4G34510	KCS17	3-ketoacyl-CoA synthase 17	0.03	Archaeplastida
Cre17.g722150	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.02	Archaeplastida
Gb_23820	No alias	3-ketoacyl-CoA synthase (KCS)	0.05	Archaeplastida
LOC_Os02g11070.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.07	Archaeplastida
LOC_Os02g56860.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
LOC_Os03g06705.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
LOC_Os03g08360.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
LOC_Os03g12030.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.05	Archaeplastida
LOC_Os05g49290.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
LOC_Os06g39750.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
Mp2g20220.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Pp3c10_2580V3.1	No alias	3-ketoacyl-CoA synthase 11	0.04	Archaeplastida
Pp3c1_26250V3.1	No alias	3-ketoacyl-CoA synthase 11	0.02	Archaeplastida
Pp3c3_31430V3.1	No alias	3-ketoacyl-CoA synthase 4	0.03	Archaeplastida
Smo437285	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.04	Archaeplastida
Smo91671	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.02	Archaeplastida
Solyc06g065560.2.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.05	Archaeplastida
Solyc12g006820.1.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
Zm00001e014514_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
Zm00001e016197_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
Zm00001e032463_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
Zm00001e033922_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Zm00001e038586_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	transferase activity, transferring acyl groups	None	Extended
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000159	protein phosphatase type 2A complex	IEP	Neighborhood
MF	GO:0003872	6-phosphofructokinase activity	IEP	Neighborhood
BP	GO:0005975	carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0006072	glycerol-3-phosphate metabolic process	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	Neighborhood
MF	GO:0008443	phosphofructokinase activity	IEP	Neighborhood
BP	GO:0010215	cellulose microfibril organization	IEP	Neighborhood
BP	GO:0016049	cell growth	IEP	Neighborhood
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Neighborhood
MF	GO:0019200	carbohydrate kinase activity	IEP	Neighborhood
MF	GO:0019208	phosphatase regulator activity	IEP	Neighborhood
MF	GO:0019888	protein phosphatase regulator activity	IEP	Neighborhood
BP	GO:0030198	extracellular matrix organization	IEP	Neighborhood
CC	GO:0031225	anchored component of membrane	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0040007	growth	IEP	Neighborhood
BP	GO:0043062	extracellular structure organization	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0046168	glycerol-3-phosphate catabolic process	IEP	Neighborhood
BP	GO:0046434	organophosphate catabolic process	IEP	Neighborhood
BP	GO:0052646	alditol phosphate metabolic process	IEP	Neighborhood
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Neighborhood
CC	GO:1903293	phosphatase complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR013601	FAE1_typ3_polyketide_synth	324	453
IPR013747	ACP_syn_III_C	470	550

External Links

No external refs found!

GSVIVT01015472001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation