GSVIVT01015540001

Description : Cell wall.cutin and suberin.biosynthesis regulation.SHN-type transcription factor

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0003909 (SeedPlants) Phylogenetic Tree(s): OG_06_0003909_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01015540001
Cluster	HCCA: Cluster_79

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00133970	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00058p00066390	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.02	Archaeplastida
AMTR_s00068p00102110	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.04	Archaeplastida
AMTR_s00069p00132820	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.03	Archaeplastida
AMTR_s00099p00122430	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00129p00112550	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AT1G01250	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G04370	ERF14, ATERF14	Ethylene-responsive element binding factor 14	0.04	Archaeplastida
AT1G43160	RAP2.6	related to AP2 6	0.03	Archaeplastida
AT3G57600	No alias	Integrase-type DNA-binding superfamily protein	0.06	Archaeplastida
AT4G13620	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT4G25490	DREB1B, ATCBF1, CBF1	C-repeat/DRE binding factor 1	0.08	Archaeplastida
AT5G51990	CBF4, DREB1D	C-repeat-binding factor 4	0.03	Archaeplastida
Cre08.g364400	No alias	No description available	0.02	Archaeplastida
GSVIVT01001089001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
GSVIVT01002195001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.07	Archaeplastida
GSVIVT01017542001	No alias	Ethylene-responsive transcription factor ERF084...	0.05	Archaeplastida
GSVIVT01028312001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01036228001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
Gb_02790	No alias	transcription factor (ERF)	0.06	Archaeplastida
Gb_09495	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Gb_10809	No alias	transcription factor (ERF). transcription factor (ERN1)	0.07	Archaeplastida
Gb_17122	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_37188	No alias	transcription factor (DREB)	0.1	Archaeplastida
LOC_Os01g12440.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os02g13710.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os02g43940.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os02g45450.1	No alias	Dehydration-responsive element-binding protein 1G...	0.02	Archaeplastida
LOC_Os03g64260.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os04g46220.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os05g49010.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os05g49700.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os06g40150.1	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.04	Archaeplastida
LOC_Os08g36920.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os09g11480.2	No alias	Ethylene-responsive transcription factor ERF112...	0.05	Archaeplastida
LOC_Os12g41060.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_10430769g0010	No alias	transcription factor (DREB)	0.05	Archaeplastida
MA_10491g0010	No alias	Ethylene-responsive transcription factor ERF017...	0.02	Archaeplastida
MA_15000g0010	No alias	Ethylene-responsive transcription factor ERF017...	0.02	Archaeplastida
MA_19420g0010	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_203191g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_3405g0010	No alias	transcription factor (ERF)	0.06	Archaeplastida
MA_411387g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_502153g0010	No alias	transcription factor (ERF)	0.12	Archaeplastida
MA_54341g0010	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.03	Archaeplastida
MA_71018g0010	No alias	no hits & (original description: none)	0.06	Archaeplastida
MA_7850076g0010	No alias	no hits & (original description: none)	0.06	Archaeplastida
MA_84578g0010	No alias	transcription factor (ERF)	0.08	Archaeplastida
MA_94228g0010	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.05	Archaeplastida
MA_9905g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
Mp5g06970.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Mp7g13760.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Pp3c10_17870V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
Pp3c11_10660V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c11_24520V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
Pp3c16_13280V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c16_4710V3.1	No alias	ethylene response factor 7	0.02	Archaeplastida
Pp3c1_5010V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c1_7800V3.1	No alias	ethylene responsive element binding factor 1	0.02	Archaeplastida
Pp3c21_13130V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c26_1890V3.1	No alias	erf domain protein 9	0.03	Archaeplastida
Pp3c27_6030V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c2_36690V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c5_810V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c5_880V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.08	Archaeplastida
Pp3c6_16660V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c6_19350V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c6_20480V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c6_28290V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
Pp3c7_20200V3.1	No alias	ethylene responsive element binding factor 2	0.1	Archaeplastida
Smo104980	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
Solyc01g005630.3.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Solyc01g090300.2.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc01g090345.1.1	No alias	Ethylene-responsive transcription factor 13...	0.02	Archaeplastida
Solyc02g090800.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc03g095973.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc03g095977.1.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Solyc03g116610.3.1	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.03	Archaeplastida
Solyc05g050830.3.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
Solyc05g052410.3.1	No alias	transcription factor (DREB)	0.05	Archaeplastida
Solyc06g066540.1.1	No alias	transcription factor (DREB)	0.09	Archaeplastida
Solyc10g078610.1.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Zm00001e000609_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e002358_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e007447_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e014415_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e015429_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e023224_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e025999_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e026573_P001	No alias	transcription factor (DREB)	0.04	Archaeplastida
Zm00001e030585_P001	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.03	Archaeplastida
Zm00001e036201_P001	No alias	Ethylene-responsive transcription factor ERF014...	0.02	Archaeplastida
Zm00001e037404_P001	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.04	Archaeplastida
Zm00001e039555_P001	No alias	no hits & (original description: none)	0.08	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005215	transporter activity	IEP	Neighborhood
BP	GO:0006810	transport	IEP	Neighborhood
MF	GO:0015267	channel activity	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Neighborhood
MF	GO:0022803	passive transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022857	transmembrane transporter activity	IEP	Neighborhood
BP	GO:0051179	localization	IEP	Neighborhood
BP	GO:0051234	establishment of localization	IEP	Neighborhood
BP	GO:0055085	transmembrane transport	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	41	85

External Links

No external refs found!

GSVIVT01015540001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation