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  5. GSVIVT01016118001

GSVIVT01016118001


Description : Solute transport.carrier-mediated transport.CDF superfamily.CaCA family.cation antiporter (CAX-type)


Gene families : OG0000674 (Archaeplastida) Phylogenetic Tree(s): OG0000674_tree ,
OG_05_0001154 (LandPlants) Phylogenetic Tree(s): OG_05_0001154_tree ,
OG_06_0001199 (SeedPlants) Phylogenetic Tree(s): OG_06_0001199_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016118001
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00243460 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.CDF... 0.03 Archaeplastida
LOC_Os01g37690.1 No alias cation antiporter (CAX) 0.03 Archaeplastida
Mp8g17780.1 No alias cation antiporter (CAX) 0.02 Archaeplastida
Solyc03g123790.4.1 No alias cation antiporter (CAX) 0.08 Archaeplastida
Solyc09g005260.4.1 No alias cation antiporter (CAX) 0.05 Archaeplastida
Solyc12g011080.3.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e006701_P002 No alias cation antiporter (CAX) 0.03 Archaeplastida
Zm00001e020746_P004 No alias cation antiporter (CAX) 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003714 transcription corepressor activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
InterPro domains Description Start Stop
IPR004837 NaCa_Exmemb 91 246
IPR004837 NaCa_Exmemb 282 419
No external refs found!