GSVIVT01016176001

Description : RNA biosynthesis.transcriptional activation.NAC transcription factor

Gene families : OG0000008 (Archaeplastida) Phylogenetic Tree(s): OG0000008_tree ,
OG_05_0000015 (LandPlants) Phylogenetic Tree(s): OG_05_0000015_tree ,
OG_06_0000234 (SeedPlants) Phylogenetic Tree(s): OG_06_0000234_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01016176001
Cluster	HCCA: Cluster_192

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00011p00251570	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
AMTR_s00022p00094930	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
AMTR_s00044p00058960	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
AMTR_s00058p00136280	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.05	Archaeplastida
AT1G12260	EMB2749,...	NAC 007	0.03	Archaeplastida
AT1G32510	NAC011, ANAC011	NAC domain containing protein 11	0.03	Archaeplastida
AT1G62700	VND5, ANAC026	Arabidopsis NAC domain containing protein 26	0.03	Archaeplastida
AT1G71930	ANAC030, VND7	vascular related NAC-domain protein 7	0.03	Archaeplastida
AT3G04070	anac047, NAC047	NAC domain containing protein 47	0.03	Archaeplastida
AT3G10480	ANAC050, NAC050	NAC domain containing protein 50	0.03	Archaeplastida
AT4G17980	anac071, NAC071	NAC domain containing protein 71	0.05	Archaeplastida
AT4G36160	VND2, NAC076, ANAC076	NAC domain containing protein 76	0.03	Archaeplastida
AT5G46590	anac096, NAC096	NAC domain containing protein 96	0.05	Archaeplastida
GSVIVT01007194001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01033032001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
Gb_13957	No alias	transcription factor (NAC)	0.03	Archaeplastida
Gb_17883	No alias	transcription factor (NAC)	0.02	Archaeplastida
Gb_27819	No alias	transcription factor (KNOX). transcription factor (NAC)	0.02	Archaeplastida
Gb_28016	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os04g38720.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os08g02160.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
LOC_Os09g24560.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os10g42130.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_10426365g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_167321g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_1948g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_5115g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_64687g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
Mp4g11910.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Mp6g02590.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Mp6g02620.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Pp3c13_10800V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Archaeplastida
Pp3c6_27690V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Archaeplastida
Solyc02g036430.2.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc02g084350.3.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc03g080090.4.1	No alias	transcription factor (NAC)	0.05	Archaeplastida
Solyc05g055480.3.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc06g069100.3.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc06g073050.2.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc07g062840.3.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc08g008660.4.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc10g055760.2.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e001540_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e006136_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e006914_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e007905_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e011786_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e014924_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e019046_P002	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e022155_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e022817_P003	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e025322_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e029404_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e034914_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e036720_P002	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e040938_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003712	transcription coregulator activity	IEP	Neighborhood
MF	GO:0003713	transcription coactivator activity	IEP	Neighborhood
MF	GO:0003860	3-hydroxyisobutyryl-CoA hydrolase activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0007062	sister chromatid cohesion	IEP	Neighborhood
BP	GO:0007064	mitotic sister chromatid cohesion	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
MF	GO:0016289	CoA hydrolase activity	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0016790	thiolester hydrolase activity	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
MF	GO:0019842	vitamin binding	IEP	Neighborhood
BP	GO:0022402	cell cycle process	IEP	Neighborhood
MF	GO:0030170	pyridoxal phosphate binding	IEP	Neighborhood
CC	GO:0031390	Ctf18 RFC-like complex	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood
BP	GO:0051276	chromosome organization	IEP	Neighborhood
MF	GO:0070279	vitamin B6 binding	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
BP	GO:1903047	mitotic cell cycle process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	15	140

External Links

No external refs found!

GSVIVT01016176001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation