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  5. GSVIVT01016225001

GSVIVT01016225001


Description : U-box domain-containing protein 14 OS=Arabidopsis thaliana


Gene families : OG0000227 (Archaeplastida) Phylogenetic Tree(s): OG0000227_tree ,
OG_05_0000670 (LandPlants) Phylogenetic Tree(s): OG_05_0000670_tree ,
OG_06_0001036 (SeedPlants) Phylogenetic Tree(s): OG_06_0001036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016225001
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00030110 evm_27.TU.AmTr_v1... U-box domain-containing protein 15 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00007p00217990 evm_27.TU.AmTr_v1... U-box domain-containing protein 16 OS=Arabidopsis thaliana 0.06 Archaeplastida
AMTR_s00025p00052670 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00072p00171260 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.09 Archaeplastida
AT1G29340 ATPUB17, PUB17 plant U-box 17 0.09 Archaeplastida
AT3G07360 PUB9, ATPUB9 plant U-box 9 0.02 Archaeplastida
AT3G46510 PUB13, ATPUB13 plant U-box 13 0.03 Archaeplastida
AT5G42340 PUB15 Plant U-Box 15 0.04 Archaeplastida
Gb_10627 No alias U-box domain-containing protein 13 OS=Arabidopsis... 0.08 Archaeplastida
Gb_10871 No alias E3 ubiquitin ligase (PUB) 0.02 Archaeplastida
Gb_12875 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
Gb_29129 No alias U-box domain-containing protein 1 OS=Medicago truncatula... 0.03 Archaeplastida
Gb_29276 No alias E3 ubiquitin ligase (PUB) 0.06 Archaeplastida
LOC_Os01g60860.1 No alias U-box domain-containing protein 16 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os02g13960.1 No alias U-box domain-containing protein 4 OS=Oryza sativa subsp.... 0.03 Archaeplastida
LOC_Os02g28720.1 No alias E3 ubiquitin ligase (PUB) 0.02 Archaeplastida
LOC_Os02g49950.1 No alias E3 ubiquitin ligase (PUB) 0.02 Archaeplastida
LOC_Os03g16824.1 No alias E3 ubiquitin ligase (PUB) 0.04 Archaeplastida
LOC_Os05g39930.1 No alias U-box domain-containing protein 16 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os06g01304.1 No alias E3 ubiquitin ligase (PUB) 0.05 Archaeplastida
LOC_Os08g37570.1 No alias U-box domain-containing protein 15 OS=Arabidopsis... 0.05 Archaeplastida
LOC_Os12g38210.1 No alias E3 ubiquitin ligase (PUB) 0.05 Archaeplastida
MA_10426688g0010 No alias U-box domain-containing protein 1 OS=Medicago truncatula... 0.02 Archaeplastida
MA_29517g0010 No alias U-box domain-containing protein 12 OS=Oryza sativa... 0.01 Archaeplastida
MA_9917294g0010 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
Mp5g12560.1 No alias E3 ubiquitin ligase (PUB) 0.02 Archaeplastida
Pp3c20_16680V3.1 No alias plant U-box 13 0.02 Archaeplastida
Pp3c20_8020V3.1 No alias plant U-box 13 0.02 Archaeplastida
Pp3c23_15760V3.1 No alias plant U-box 13 0.03 Archaeplastida
Pp3c23_8770V3.1 No alias plant U-box 14 0.02 Archaeplastida
Smo61948 No alias U-box domain-containing protein 13 OS=Arabidopsis thaliana 0.03 Archaeplastida
Smo75609 No alias U-box domain-containing protein 1 OS=Medicago truncatula 0.02 Archaeplastida
Solyc02g072080.1.1 No alias U-box domain-containing protein 17 OS=Arabidopsis... 0.12 Archaeplastida
Solyc04g082440.4.1 No alias U-box domain-containing protein 15 OS=Arabidopsis... 0.03 Archaeplastida
Solyc06g076040.3.1 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
Solyc09g018230.1.1 No alias U-box domain-containing protein 16 OS=Arabidopsis... 0.02 Archaeplastida
Solyc09g056450.4.1 No alias U-box domain-containing protein 9 OS=Arabidopsis... 0.05 Archaeplastida
Solyc11g008390.2.1 No alias E3 ubiquitin ligase (PUB) 0.07 Archaeplastida
Zm00001e003398_P001 No alias U-box domain-containing protein 15 OS=Arabidopsis... 0.06 Archaeplastida
Zm00001e018161_P001 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
Zm00001e028839_P001 No alias U-box domain-containing protein 16 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e031915_P001 No alias U-box domain-containing protein 16 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
MF GO:0008883 glutamyl-tRNA reductase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003613 Ubox_domain 213 283
IPR000225 Armadillo 340 379
No external refs found!