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Description : Nucleolar complex protein 2 homolog OS=Arabidopsis thaliana
Gene families : OG0002701 (Archaeplastida) Phylogenetic Tree(s): OG0002701_tree ,
OG_05_0012032 (LandPlants) Phylogenetic Tree(s): OG_05_0012032_tree ,
OG_06_0012089 (SeedPlants) Phylogenetic Tree(s): OG_06_0012089_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01016319001 | |
| Cluster | HCCA: Cluster_172 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G18220 | No alias | Noc2p family | 0.14 | Archaeplastida | |
| AT3G55510 | RBL | Noc2p family | 0.16 | Archaeplastida | |
| Cpa|evm.model.tig00020610.71 | No alias | Nucleolar complex protein 2 homolog OS=Arabidopsis thaliana | 0.01 | Archaeplastida | |
| Cre09.g391652 | No alias | Nucleolar complex protein 2 homolog OS=Arabidopsis thaliana | 0.11 | Archaeplastida | |
| LOC_Os10g35280.1 | No alias | component NOC2 of ribosomal subunit nuclear export complexes | 0.14 | Archaeplastida | |
| LOC_Os12g06610.1 | No alias | component NOC2 of ribosomal subunit nuclear export complexes | 0.06 | Archaeplastida | |
| MA_9980g0020 | No alias | component NOC2 of ribosomal subunit nuclear export complexes | 0.03 | Archaeplastida | |
| Mp1g23860.1 | No alias | component NOC2 of ribosomal subunit nuclear export complexes | 0.14 | Archaeplastida | |
| Pp3c24_4150V3.1 | No alias | Noc2p family | 0.08 | Archaeplastida | |
| Solyc02g081680.4.1 | No alias | component NOC2 of ribosomal subunit nuclear export complexes | 0.14 | Archaeplastida | |
| Zm00001e009196_P001 | No alias | component NOC2 of ribosomal subunit nuclear export complexes | 0.09 | Archaeplastida | |
| Zm00001e012606_P001 | No alias | component NOC2 of ribosomal subunit nuclear export complexes | 0.09 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | Neighborhood |
| BP | GO:0000154 | rRNA modification | IEP | Neighborhood |
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| BP | GO:0001510 | RNA methylation | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003697 | single-stranded DNA binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0003724 | RNA helicase activity | IEP | Neighborhood |
| MF | GO:0004004 | ATP-dependent RNA helicase activity | IEP | Neighborhood |
| MF | GO:0004386 | helicase activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| CC | GO:0005634 | nucleus | IEP | Neighborhood |
| CC | GO:0005730 | nucleolus | IEP | Neighborhood |
| BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
| BP | GO:0006396 | RNA processing | IEP | Neighborhood |
| MF | GO:0008026 | ATP-dependent helicase activity | IEP | Neighborhood |
| MF | GO:0008134 | transcription factor binding | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| MF | GO:0008168 | methyltransferase activity | IEP | Neighborhood |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Neighborhood |
| MF | GO:0008186 | RNA-dependent ATPase activity | IEP | Neighborhood |
| MF | GO:0008649 | rRNA methyltransferase activity | IEP | Neighborhood |
| BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
| MF | GO:0016435 | rRNA (guanine) methyltransferase activity | IEP | Neighborhood |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| BP | GO:0031167 | rRNA methylation | IEP | Neighborhood |
| CC | GO:0031360 | intrinsic component of thylakoid membrane | IEP | Neighborhood |
| CC | GO:0031361 | integral component of thylakoid membrane | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| BP | GO:0036265 | RNA (guanine-N7)-methylation | IEP | Neighborhood |
| BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
| MF | GO:0043015 | gamma-tubulin binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| CC | GO:0043226 | organelle | IEP | Neighborhood |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
| BP | GO:0043414 | macromolecule methylation | IEP | Neighborhood |
| BP | GO:0044085 | cellular component biogenesis | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044428 | nuclear part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| MF | GO:0070035 | purine NTP-dependent helicase activity | IEP | Neighborhood |
| BP | GO:0070475 | rRNA base methylation | IEP | Neighborhood |
| BP | GO:0070476 | rRNA (guanine-N7)-methylation | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
| MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005343 | Noc2 | 374 | 666 |
| No external refs found! |