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  5. GSVIVT01016523001

GSVIVT01016523001


Description : RNA biosynthesis.transcriptional activation.GRAS transcription factor


Gene families : OG0001039 (Archaeplastida) Phylogenetic Tree(s): OG0001039_tree ,
OG_05_0000632 (LandPlants) Phylogenetic Tree(s): OG_05_0000632_tree ,
OG_06_0000991 (SeedPlants) Phylogenetic Tree(s): OG_06_0000991_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016523001
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AT1G07530 ATGRAS2, SCL14, GRAS2 SCARECROW-like 14 0.03 Archaeplastida
AT2G29060 No alias GRAS family transcription factor 0.03 Archaeplastida
AT2G29065 No alias GRAS family transcription factor 0.03 Archaeplastida
AT3G46600 No alias GRAS family transcription factor 0.04 Archaeplastida
LOC_Os11g47870.1 No alias transcription factor (GRAS) 0.03 Archaeplastida
LOC_Os11g47890.1 No alias transcription factor (GRAS) 0.06 Archaeplastida
MA_45656g0030 No alias transcription factor (GRAS) 0.04 Archaeplastida
Solyc06g082530.3.1 No alias transcription factor (GRAS) 0.05 Archaeplastida
Zm00001e001211_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e020921_P001 No alias transcription factor (GRAS) 0.03 Archaeplastida
Zm00001e020937_P001 No alias transcription factor (GRAS) 0.02 Archaeplastida
Zm00001e020940_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e020943_P001 No alias transcription factor (GRAS) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016289 CoA hydrolase activity IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005202 TF_GRAS 344 522
No external refs found!