GSVIVT01016731001

Description : Protein degradation.26S proteasome.20S core protease.alpha-type subunits.alpha type-1 component

Gene families : OG0002876 (Archaeplastida) Phylogenetic Tree(s): OG0002876_tree ,
OG_05_0002743 (LandPlants) Phylogenetic Tree(s): OG_05_0002743_tree ,
OG_06_0002914 (SeedPlants) Phylogenetic Tree(s): OG_06_0002914_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01016731001
Cluster	HCCA: Cluster_1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00147p00090390	evm_27.TU.AmTr_v1...	Protein degradation.26S proteasome.20S core...	0.04	Archaeplastida
AT2G05840	PAA2	20S proteasome subunit PAA2	0.05	Archaeplastida
AT5G35590	PAA1	proteasome alpha subunit A1	0.04	Archaeplastida
Cpa\|evm.model.tig00001160.15	No alias	Protein degradation.26S proteasome.20S core...	0.06	Archaeplastida
Cre17.g705400	No alias	Protein degradation.26S proteasome.20S core...	0.11	Archaeplastida
Gb_32855	No alias	no hits & (original description: none)	0.03	Archaeplastida
Gb_32856	No alias	component alpha type-1 of 26S proteasome	0.07	Archaeplastida
LOC_Os03g08280.1	No alias	component alpha type-1 of 26S proteasome	0.03	Archaeplastida
Mp3g08330.1	No alias	component alpha type-1 of 26S proteasome	0.05	Archaeplastida
Smo272088	No alias	Protein degradation.26S proteasome.20S core...	0.04	Archaeplastida
Solyc12g009140.3.1	No alias	component alpha type-1 of 26S proteasome	0.05	Archaeplastida
Zm00001e000584_P001	No alias	component alpha type-1 of 26S proteasome	0.08	Archaeplastida
Zm00001e038868_P001	No alias	component alpha type-1 of 26S proteasome	0.07	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEA	Interproscan
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	None	Extended
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004298	threonine-type endopeptidase activity	IEP	Neighborhood
CC	GO:0005741	mitochondrial outer membrane	IEP	Neighborhood
CC	GO:0005839	proteasome core complex	IEP	Neighborhood
MF	GO:0008378	galactosyltransferase activity	IEP	Neighborhood
CC	GO:0019867	outer membrane	IEP	Neighborhood
CC	GO:0031090	organelle membrane	IEP	Neighborhood
CC	GO:0031966	mitochondrial membrane	IEP	Neighborhood
CC	GO:0031968	organelle outer membrane	IEP	Neighborhood
CC	GO:0044429	mitochondrial part	IEP	Neighborhood
MF	GO:0070003	threonine-type peptidase activity	IEP	Neighborhood
CC	GO:0098588	bounding membrane of organelle	IEP	Neighborhood
CC	GO:0098805	whole membrane	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001353	Proteasome_sua/b	35	220
IPR000426	Proteasome_asu_N	9	31

External Links

No external refs found!

GSVIVT01016731001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation