Coexpression cluster: Cluster_1 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005839 proteasome core complex 13.41% (11/82) 7.7 0.0 0.0
GO:0070003 threonine-type peptidase activity 13.41% (11/82) 7.7 0.0 0.0
GO:0004298 threonine-type endopeptidase activity 13.41% (11/82) 7.7 0.0 0.0
GO:0051603 proteolysis involved in cellular protein catabolic process 17.07% (14/82) 6.41 0.0 0.0
GO:0004175 endopeptidase activity 17.07% (14/82) 4.88 0.0 0.0
GO:0044424 intracellular part 28.05% (23/82) 2.94 0.0 0.0
GO:0044464 cell part 28.05% (23/82) 2.86 0.0 0.0
GO:0032991 protein-containing complex 23.17% (19/82) 3.31 0.0 0.0
GO:0070011 peptidase activity, acting on L-amino acid peptides 17.07% (14/82) 3.66 0.0 0.0
GO:0008233 peptidase activity 17.07% (14/82) 3.61 0.0 0.0
GO:0006508 proteolysis 17.07% (14/82) 3.6 0.0 0.0
GO:0005575 cellular_component 35.37% (29/82) 2.06 0.0 0.0
GO:0019773 proteasome core complex, alpha-subunit complex 3.66% (3/82) 8.33 0.0 1e-06
GO:0006807 nitrogen compound metabolic process 29.27% (24/82) 1.75 0.0 1e-06
GO:1901564 organonitrogen compound metabolic process 25.61% (21/82) 1.83 0.0 4e-06
GO:0016787 hydrolase activity 21.95% (18/82) 1.89 1e-06 2e-05
GO:0044238 primary metabolic process 30.49% (25/82) 1.44 2e-06 3.5e-05
GO:0071704 organic substance metabolic process 30.49% (25/82) 1.39 4e-06 6.6e-05
GO:0043170 macromolecule metabolic process 24.39% (20/82) 1.6 6e-06 9e-05
GO:0019538 protein metabolic process 20.73% (17/82) 1.78 6e-06 9.4e-05
GO:0140096 catalytic activity, acting on a protein 18.29% (15/82) 1.84 1.5e-05 0.00021
GO:0034654 nucleobase-containing compound biosynthetic process 7.32% (6/82) 3.39 2.4e-05 0.000319
GO:0019438 aromatic compound biosynthetic process 7.32% (6/82) 3.1 7.4e-05 0.000936
GO:0018130 heterocycle biosynthetic process 7.32% (6/82) 3.06 8.6e-05 0.001037
GO:0031090 organelle membrane 3.66% (3/82) 5.11 9e-05 0.001048
GO:1901362 organic cyclic compound biosynthetic process 7.32% (6/82) 2.92 0.000147 0.001643
GO:0043632 modification-dependent macromolecule catabolic process 3.66% (3/82) 4.74 0.000193 0.001933
GO:0019941 modification-dependent protein catabolic process 3.66% (3/82) 4.74 0.000193 0.001933
GO:0006511 ubiquitin-dependent protein catabolic process 3.66% (3/82) 4.74 0.000193 0.001933
GO:0044422 organelle part 7.32% (6/82) 2.8 0.000225 0.002113
GO:0044446 intracellular organelle part 7.32% (6/82) 2.8 0.000225 0.002113
GO:0008152 metabolic process 32.93% (27/82) 0.98 0.000239 0.00217
GO:0044429 mitochondrial part 3.66% (3/82) 4.59 0.000264 0.00233
GO:0044265 cellular macromolecule catabolic process 3.66% (3/82) 4.42 0.000375 0.003212
GO:0044271 cellular nitrogen compound biosynthetic process 8.54% (7/82) 2.37 0.000418 0.003473
GO:0015986 ATP synthesis coupled proton transport 2.44% (2/82) 5.42 0.000979 0.006623
GO:0098588 bounding membrane of organelle 2.44% (2/82) 5.42 0.000979 0.006623
GO:0098798 mitochondrial protein complex 2.44% (2/82) 5.42 0.000979 0.006623
GO:0015985 energy coupled proton transport, down electrochemical gradient 2.44% (2/82) 5.42 0.000979 0.006623
GO:0098800 inner mitochondrial membrane protein complex 2.44% (2/82) 5.52 0.00085 0.006685
GO:0044455 mitochondrial membrane part 2.44% (2/82) 5.52 0.00085 0.006685
GO:0006164 purine nucleotide biosynthetic process 3.66% (3/82) 3.98 0.000918 0.007032
GO:0072522 purine-containing compound biosynthetic process 3.66% (3/82) 3.96 0.000963 0.007184
GO:0009057 macromolecule catabolic process 3.66% (3/82) 3.85 0.001206 0.007976
GO:0009165 nucleotide biosynthetic process 3.66% (3/82) 3.76 0.001426 0.009021
GO:1901293 nucleoside phosphate biosynthetic process 3.66% (3/82) 3.76 0.001426 0.009021
GO:0044425 membrane part 9.76% (8/82) 1.88 0.00151 0.009347
GO:0072521 purine-containing compound metabolic process 3.66% (3/82) 3.7 0.001607 0.00935
GO:0006163 purine nucleotide metabolic process 3.66% (3/82) 3.72 0.001545 0.009366
GO:0044444 cytoplasmic part 7.32% (6/82) 2.26 0.001605 0.009529
GO:0031966 mitochondrial membrane 2.44% (2/82) 4.87 0.002123 0.012113
GO:0009117 nucleotide metabolic process 3.66% (3/82) 3.49 0.002469 0.013819
GO:0003824 catalytic activity 34.15% (28/82) 0.73 0.002822 0.015209
GO:0006753 nucleoside phosphate metabolic process 3.66% (3/82) 3.42 0.002809 0.015426
GO:0004019 adenylosuccinate synthase activity 1.22% (1/82) 8.33 0.003112 0.016174
GO:0009055 electron transfer activity 3.66% (3/82) 3.37 0.003083 0.01631
GO:0034641 cellular nitrogen compound metabolic process 9.76% (8/82) 1.67 0.003709 0.018609
GO:0006352 DNA-templated transcription, initiation 2.44% (2/82) 4.47 0.003679 0.018782
GO:0090407 organophosphate biosynthetic process 3.66% (3/82) 3.21 0.004221 0.020821
GO:0055086 nucleobase-containing small molecule metabolic process 3.66% (3/82) 3.17 0.004571 0.021804
GO:0032774 RNA biosynthetic process 3.66% (3/82) 3.17 0.004571 0.021804
GO:0008150 biological_process 37.8% (31/82) 0.62 0.005511 0.025866
GO:0044249 cellular biosynthetic process 8.54% (7/82) 1.68 0.006357 0.026055
GO:0044248 cellular catabolic process 3.66% (3/82) 3.01 0.006283 0.026119
GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly 1.22% (1/82) 7.33 0.006215 0.026212
GO:0061617 MICOS complex 1.22% (1/82) 7.33 0.006215 0.026212
GO:0070070 proton-transporting V-type ATPase complex assembly 1.22% (1/82) 7.33 0.006215 0.026212
GO:0006665 sphingolipid metabolic process 1.22% (1/82) 7.33 0.006215 0.026212
GO:0006672 ceramide metabolic process 1.22% (1/82) 7.33 0.006215 0.026212
GO:0000030 mannosyltransferase activity 1.22% (1/82) 7.33 0.006215 0.026212
GO:0005672 transcription factor TFIIA complex 1.22% (1/82) 7.33 0.006215 0.026212
GO:0006139 nucleobase-containing compound metabolic process 7.32% (6/82) 1.84 0.006674 0.026972
GO:0031227 intrinsic component of endoplasmic reticulum membrane 1.22% (1/82) 6.74 0.009309 0.032248
GO:0003954 NADH dehydrogenase activity 1.22% (1/82) 6.74 0.009309 0.032248
GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity 1.22% (1/82) 6.74 0.009309 0.032248
GO:0008137 NADH dehydrogenase (ubiquinone) activity 1.22% (1/82) 6.74 0.009309 0.032248
GO:0070071 proton-transporting two-sector ATPase complex assembly 1.22% (1/82) 6.74 0.009309 0.032248
GO:0050136 NADH dehydrogenase (quinone) activity 1.22% (1/82) 6.74 0.009309 0.032248
GO:0030176 integral component of endoplasmic reticulum membrane 1.22% (1/82) 6.74 0.009309 0.032248
GO:1901575 organic substance catabolic process 3.66% (3/82) 2.87 0.008162 0.032535
GO:0019637 organophosphate metabolic process 3.66% (3/82) 2.77 0.009766 0.033433
GO:0016020 membrane 8.54% (7/82) 1.59 0.008733 0.033439
GO:0009056 catabolic process 3.66% (3/82) 2.83 0.008854 0.03346
GO:0098796 membrane protein complex 3.66% (3/82) 2.84 0.008678 0.033669
GO:1901576 organic substance biosynthetic process 8.54% (7/82) 1.59 0.008613 0.033869
GO:0009145 purine nucleoside triphosphate biosynthetic process 2.44% (2/82) 3.66 0.011054 0.034963
GO:0006754 ATP biosynthetic process 2.44% (2/82) 3.66 0.011054 0.034963
GO:0009201 ribonucleoside triphosphate biosynthetic process 2.44% (2/82) 3.66 0.011054 0.034963
GO:0009142 nucleoside triphosphate biosynthetic process 2.44% (2/82) 3.66 0.011054 0.034963
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 2.44% (2/82) 3.66 0.011054 0.034963
GO:0006725 cellular aromatic compound metabolic process 7.32% (6/82) 1.69 0.010988 0.036751
GO:0046483 heterocycle metabolic process 7.32% (6/82) 1.69 0.010904 0.036896
GO:0046034 ATP metabolic process 2.44% (2/82) 3.55 0.012771 0.03754
GO:0009127 purine nucleoside monophosphate biosynthetic process 2.44% (2/82) 3.55 0.012771 0.03754
GO:0009168 purine ribonucleoside monophosphate biosynthetic process 2.44% (2/82) 3.55 0.012771 0.03754
GO:0009156 ribonucleoside monophosphate biosynthetic process 2.44% (2/82) 3.55 0.012771 0.03754
GO:0009124 nucleoside monophosphate biosynthetic process 2.44% (2/82) 3.55 0.012771 0.03754
GO:0009205 purine ribonucleoside triphosphate metabolic process 2.44% (2/82) 3.52 0.013218 0.03771
GO:0009199 ribonucleoside triphosphate metabolic process 2.44% (2/82) 3.52 0.013218 0.03771
GO:0009144 purine nucleoside triphosphate metabolic process 2.44% (2/82) 3.52 0.013218 0.03771
GO:0046390 ribose phosphate biosynthetic process 2.44% (2/82) 3.45 0.014598 0.038618
GO:0009123 nucleoside monophosphate metabolic process 2.44% (2/82) 3.45 0.014598 0.038618
GO:0009126 purine nucleoside monophosphate metabolic process 2.44% (2/82) 3.45 0.014598 0.038618
GO:0009152 purine ribonucleotide biosynthetic process 2.44% (2/82) 3.45 0.014598 0.038618
GO:0009167 purine ribonucleoside monophosphate metabolic process 2.44% (2/82) 3.45 0.014598 0.038618
GO:0009161 ribonucleoside monophosphate metabolic process 2.44% (2/82) 3.45 0.014598 0.038618
GO:0009260 ribonucleotide biosynthetic process 2.44% (2/82) 3.45 0.014598 0.038618
GO:1902600 proton transmembrane transport 2.44% (2/82) 3.49 0.013671 0.038625
GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) 1.22% (1/82) 6.33 0.012392 0.038776
GO:1901360 organic cyclic compound metabolic process 7.32% (6/82) 1.64 0.012663 0.039201
GO:0009141 nucleoside triphosphate metabolic process 2.44% (2/82) 3.42 0.015071 0.039511
GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) 1.22% (1/82) 6.01 0.015467 0.040186
GO:0009058 biosynthetic process 8.54% (7/82) 1.39 0.017467 0.044981
GO:0005338 nucleotide-sugar transmembrane transporter activity 1.22% (1/82) 5.74 0.018532 0.045317
GO:0090481 pyrimidine nucleotide-sugar transmembrane transport 1.22% (1/82) 5.74 0.018532 0.045317
GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) 1.22% (1/82) 5.74 0.018532 0.045317
GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity 1.22% (1/82) 5.74 0.018532 0.045317
GO:0000139 Golgi membrane 1.22% (1/82) 5.74 0.018532 0.045317
GO:0015780 nucleotide-sugar transmembrane transport 1.22% (1/82) 5.74 0.018532 0.045317
GO:0009150 purine ribonucleotide metabolic process 2.44% (2/82) 3.18 0.020699 0.049373
GO:0015078 proton transmembrane transporter activity 2.44% (2/82) 3.18 0.020699 0.049373
GO:0009259 ribonucleotide metabolic process 2.44% (2/82) 3.18 0.020699 0.049373
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_117 0.054 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_186 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_200 0.104 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_204 0.036 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_226 0.035 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_240 0.035 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_50 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_89 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_95 0.034 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_129 0.032 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_160 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_184 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_194 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_245 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_267 0.023 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_3 0.023 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_73 0.043 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_91 0.023 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_128 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_20 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_32 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_131 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_227 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_234 0.039 Archaeplastida Compare
Gingko biloba HCCA Cluster_235 0.029 Archaeplastida Compare
Gingko biloba HCCA Cluster_276 0.058 Archaeplastida Compare
Gingko biloba HCCA Cluster_315 0.028 Archaeplastida Compare
Gingko biloba HCCA Cluster_323 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_111 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_155 0.081 Archaeplastida Compare
Zea mays HCCA Cluster_250 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_261 0.11 Archaeplastida Compare
Zea mays HCCA Cluster_340 0.041 Archaeplastida Compare
Zea mays HCCA Cluster_350 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_361 0.034 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_20 0.084 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_108 0.049 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_119 0.029 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_78 0.033 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_99 0.064 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_104 0.029 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_121 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_155 0.05 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_185 0.03 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_247 0.028 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_298 0.033 Archaeplastida Compare
Picea abies HCCA Cluster_24 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_71 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_74 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_84 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_238 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_244 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_339 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_451 0.043 Archaeplastida Compare
Oryza sativa HCCA Cluster_77 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_93 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_157 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_164 0.112 Archaeplastida Compare
Oryza sativa HCCA Cluster_215 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_285 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_307 0.027 Archaeplastida Compare
Oryza sativa HCCA Cluster_342 0.03 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_3 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_12 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_45 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_88 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_90 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_144 0.03 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_148 0.047 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_79 0.05 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_105 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_164 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_198 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_220 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_226 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_265 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_274 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_284 0.087 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_37 0.062 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_50 0.155 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_89 0.02 Archaeplastida Compare
Sequences (82) (download table)

InterPro Domains

GO Terms

Family Terms