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  5. GSVIVT01017010001

GSVIVT01017010001


Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.HD-ZIP III transcription factor


Gene families : OG0000862 (Archaeplastida) Phylogenetic Tree(s): OG0000862_tree ,
OG_05_0000983 (LandPlants) Phylogenetic Tree(s): OG_05_0000983_tree ,
OG_06_0000998 (SeedPlants) Phylogenetic Tree(s): OG_06_0000998_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017010001
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00085520 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.07 Archaeplastida
AMTR_s00148p00033940 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
AT1G52150 ICU4, ATHB15,... Homeobox-leucine zipper family protein / lipid-binding... 0.05 Archaeplastida
AT4G32880 HB-8, ATHB8, ATHB-8 homeobox gene 8 0.04 Archaeplastida
AT5G60690 IFL1, IFL, REV Homeobox-leucine zipper family protein / lipid-binding... 0.03 Archaeplastida
Gb_02083 No alias transcription factor (HD-ZIP III) 0.06 Archaeplastida
Gb_18245 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida
Gb_22761 No alias transcription factor (HD-ZIP III) 0.05 Archaeplastida
LOC_Os01g10320.1 No alias transcription factor (HD-ZIP III) 0.02 Archaeplastida
LOC_Os03g43930.1 No alias transcription factor (HD-ZIP III) 0.04 Archaeplastida
LOC_Os12g41860.1 No alias transcription factor (HD-ZIP III) 0.04 Archaeplastida
MA_10427484g0010 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida
MA_112057g0010 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida
MA_19520g0020 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida
Mp1g24140.1 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida
Pp3c10_19630V3.1 No alias Homeobox-leucine zipper family protein / lipid-binding... 0.03 Archaeplastida
Smo270225 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
Solyc08g066500.4.1 No alias transcription factor (HD-ZIP III) 0.07 Archaeplastida
Solyc12g044410.2.1 No alias transcription factor (HD-ZIP III) 0.04 Archaeplastida
Zm00001e000073_P001 No alias transcription factor (HD-ZIP III) 0.04 Archaeplastida
Zm00001e004553_P004 No alias transcription factor (HD-ZIP III) 0.05 Archaeplastida
Zm00001e005034_P001 No alias transcription factor (HD-ZIP III) 0.06 Archaeplastida
Zm00001e012408_P002 No alias transcription factor (HD-ZIP III) 0.07 Archaeplastida
Zm00001e018118_P002 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida
Zm00001e025995_P002 No alias transcription factor (HD-ZIP III) 0.03 Archaeplastida
Zm00001e039093_P002 No alias transcription factor (HD-ZIP III) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005337 nucleoside transmembrane transporter activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006855 drug transmembrane transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015238 drug transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
BP GO:0015858 nucleoside transport IEP Neighborhood
BP GO:0015893 drug transport IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901642 nucleoside transmembrane transport IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013978 MEKHLA 692 834
IPR002913 START_lipid-bd_dom 158 366
IPR001356 Homeobox_dom 14 72
No external refs found!