1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01017105001

GSVIVT01017105001


Description : RNA biosynthesis.transcriptional activation.OFP transcription factor


Gene families : OG0000130 (Archaeplastida) Phylogenetic Tree(s): OG0000130_tree ,
OG_05_0000050 (LandPlants) Phylogenetic Tree(s): OG_05_0000050_tree ,
OG_06_0000302 (SeedPlants) Phylogenetic Tree(s): OG_06_0000302_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017105001
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00037560 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.OFP... 0.03 Archaeplastida
AMTR_s00007p00212750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.OFP... 0.03 Archaeplastida
AMTR_s00103p00131630 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.OFP... 0.06 Archaeplastida
AMTR_s00109p00026640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.OFP... 0.03 Archaeplastida
AT1G06920 OFP4, ATOFP4 ovate family protein 4 0.04 Archaeplastida
AT2G30400 OFP2, ATOFP2 ovate family protein 2 0.04 Archaeplastida
AT2G36026 No alias Ovate family protein 0.04 Archaeplastida
AT3G52525 ATOFP6, OFP6 ovate family protein 6 0.02 Archaeplastida
AT4G04025 No alias No description available 0.04 Archaeplastida
AT5G58360 ATOFP3, OFP3 ovate family protein 3 0.05 Archaeplastida
GSVIVT01017984001 No alias RNA biosynthesis.transcriptional activation.OFP... 0.03 Archaeplastida
Gb_27133 No alias transcription factor (OFP) 0.04 Archaeplastida
LOC_Os01g64430.1 No alias transcription factor (OFP) 0.03 Archaeplastida
LOC_Os02g45620.1 No alias transcription factor (OFP) 0.04 Archaeplastida
LOC_Os03g06350.1 No alias transcription factor (OFP) 0.03 Archaeplastida
LOC_Os04g37510.1 No alias transcription factor (OFP) 0.04 Archaeplastida
LOC_Os04g48830.1 No alias transcription factor (OFP) 0.04 Archaeplastida
LOC_Os05g25910.1 No alias transcription factor (OFP) 0.03 Archaeplastida
LOC_Os05g36970.1 No alias transcription factor (OFP) 0.04 Archaeplastida
LOC_Os05g36990.1 No alias transcription factor (OFP) 0.02 Archaeplastida
LOC_Os05g44090.1 No alias transcription factor (OFP) 0.03 Archaeplastida
LOC_Os07g48150.1 No alias transcription factor (OFP) 0.03 Archaeplastida
LOC_Os10g29610.1 No alias transcription factor (OFP) 0.03 Archaeplastida
LOC_Os10g38880.1 No alias transcription factor (OFP) 0.04 Archaeplastida
LOC_Os11g05780.1 No alias transcription factor (OFP) 0.04 Archaeplastida
LOC_Os12g06150.1 No alias transcription factor (OFP) 0.03 Archaeplastida
LOC_Os12g06160.1 No alias transcription factor (OFP) 0.03 Archaeplastida
MA_10434319g0010 No alias transcription factor (OFP) 0.02 Archaeplastida
MA_23257g0010 No alias transcription factor (OFP) 0.03 Archaeplastida
MA_798051g0010 No alias transcription factor (OFP) 0.02 Archaeplastida
Pp3c1_110V3.1 No alias ovate family protein 8 0.04 Archaeplastida
Smo69626 No alias RNA biosynthesis.transcriptional activation.OFP... 0.02 Archaeplastida
Solyc02g085500.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc03g034100.4.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Solyc06g074020.2.1 No alias transcription factor (OFP) 0.03 Archaeplastida
Solyc09g018200.1.1 No alias transcription factor (OFP) 0.03 Archaeplastida
Solyc09g082080.1.1 No alias transcription factor (OFP) 0.05 Archaeplastida
Zm00001e007176_P001 No alias transcription factor (OFP) 0.05 Archaeplastida
Zm00001e008181_P001 No alias transcription factor (OFP) 0.03 Archaeplastida
Zm00001e016408_P001 No alias transcription factor (OFP) 0.03 Archaeplastida
Zm00001e019186_P001 No alias transcription factor (OFP) 0.04 Archaeplastida
Zm00001e019432_P001 No alias transcription factor (OFP) 0.03 Archaeplastida
Zm00001e025928_P001 No alias transcription factor (OFP) 0.04 Archaeplastida
Zm00001e031752_P001 No alias transcription factor (OFP) 0.05 Archaeplastida
Zm00001e031917_P001 No alias transcription factor (OFP) 0.02 Archaeplastida
Zm00001e039401_P001 No alias transcription factor (OFP) 0.02 Archaeplastida
Zm00001e040967_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
BP GO:0008272 sulfate transport IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
CC GO:0031012 extracellular matrix IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
CC GO:0044421 extracellular region part IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR006458 Ovate_C 229 288
No external refs found!