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  5. GSVIVT01017112001

GSVIVT01017112001


Description : RNA biosynthesis.transcriptional activation.Trihelix transcription factor


Gene families : OG0000562 (Archaeplastida) Phylogenetic Tree(s): OG0000562_tree ,
OG_05_0000321 (LandPlants) Phylogenetic Tree(s): OG_05_0000321_tree ,
OG_06_0000571 (SeedPlants) Phylogenetic Tree(s): OG_06_0000571_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017112001
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AT1G54060 ASIL1 6B-interacting protein 1-like 1 0.04 Archaeplastida
AT3G11100 No alias sequence-specific DNA binding transcription factors 0.03 Archaeplastida
AT3G24490 No alias Alcohol dehydrogenase transcription factor Myb/SANT-like... 0.04 Archaeplastida
MA_4997g0010 No alias transcription factor (Trihelix) 0.04 Archaeplastida
MA_8003390g0010 No alias transcription factor (Trihelix) 0.03 Archaeplastida
Mp7g06290.1 No alias transcription factor (Trihelix) 0.02 Archaeplastida
Solyc03g122030.1.1 No alias transcription factor (Trihelix) 0.04 Archaeplastida
Solyc05g018350.4.1 No alias transcription factor (Trihelix) 0.03 Archaeplastida
Solyc12g043090.3.1 No alias transcription factor (Trihelix) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004559 alpha-mannosidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006013 mannose metabolic process IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!