AMTR_s00039p00225530 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00039.206

Description : Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter

Gene families : OG0000050 (Archaeplastida) Phylogenetic Tree(s): OG0000050_tree ,
OG_05_0000049 (LandPlants) Phylogenetic Tree(s): OG_05_0000049_tree ,
OG_06_0000052 (SeedPlants) Phylogenetic Tree(s): OG_06_0000052_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00039p00225530
Cluster	HCCA: Cluster_35

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00040p00185210	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
AT1G59870	PEN3, ABCG36,...	ABC-2 and Plant PDR ABC-type transporter family protein	0.03	Archaeplastida
AT2G36380	PDR6, ATPDR6	pleiotropic drug resistance 6	0.03	Archaeplastida
AT2G37280	ATPDR5, PDR5	pleiotropic drug resistance 5	0.02	Archaeplastida
AT4G15233	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.03	Archaeplastida
Cpa\|evm.model.tig00020537.52	No alias	ABC transporter G family member 17 OS=Arabidopsis thaliana	0.02	Archaeplastida
Cpa\|evm.model.tig00020902.2	No alias	ABC transporter G family member 29 OS=Arabidopsis thaliana	0.02	Archaeplastida
GSVIVT01017201001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
GSVIVT01017676001	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
GSVIVT01031314001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
GSVIVT01031378001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
GSVIVT01033804001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
GSVIVT01034746001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
GSVIVT01034748001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
GSVIVT01036184001	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Gb_38109	No alias	subfamily ABCG transporter	0.04	Archaeplastida
LOC_Os01g42370.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
LOC_Os01g42380.1	No alias	subfamily ABCG transporter	0.04	Archaeplastida
LOC_Os01g42410.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
LOC_Os02g21340.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
LOC_Os07g33780.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
LOC_Os08g29570.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
LOC_Os12g13720.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
LOC_Os12g32820.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
MA_10426781g0010	No alias	subfamily ABCG transporter	0.03	Archaeplastida
MA_10429200g0010	No alias	ABC transporter G family member 34 OS=Arabidopsis...	0.03	Archaeplastida
MA_135152g0010	No alias	subfamily ABCG transporter	0.03	Archaeplastida
MA_178007g0010	No alias	RAB-GTPase-activating protein (RAB-GAP). subfamily ABCG...	0.02	Archaeplastida
Mp2g07030.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Mp2g21800.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Pp3c14_11830V3.1	No alias	pleiotropic drug resistance 7	0.03	Archaeplastida
Pp3c16_9600V3.1	No alias	pleiotropic drug resistance 11	0.02	Archaeplastida
Pp3c22_9340V3.1	No alias	pleiotropic drug resistance 12	0.02	Archaeplastida
Smo267739	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Smo412710	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Smo417263	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Smo99541	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Solyc09g091660.3.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Zm00001e020667_P001	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Zm00001e024257_P001	No alias	subfamily ABCG transporter	0.04	Archaeplastida
Zm00001e027850_P001	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Zm00001e037233_P001	No alias	subfamily ABCG transporter	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0003872	6-phosphofructokinase activity	IEP	Neighborhood
MF	GO:0004197	cysteine-type endopeptidase activity	IEP	Neighborhood
MF	GO:0004673	protein histidine kinase activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
CC	GO:0005945	6-phosphofructokinase complex	IEP	Neighborhood
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0007165	signal transduction	IEP	Neighborhood
BP	GO:0008150	biological_process	IEP	Neighborhood
MF	GO:0008443	phosphofructokinase activity	IEP	Neighborhood
MF	GO:0009039	urease activity	IEP	Neighborhood
BP	GO:0009314	response to radiation	IEP	Neighborhood
BP	GO:0009416	response to light stimulus	IEP	Neighborhood
BP	GO:0009581	detection of external stimulus	IEP	Neighborhood
BP	GO:0009582	detection of abiotic stimulus	IEP	Neighborhood
BP	GO:0009583	detection of light stimulus	IEP	Neighborhood
BP	GO:0009584	detection of visible light	IEP	Neighborhood
BP	GO:0009605	response to external stimulus	IEP	Neighborhood
BP	GO:0009628	response to abiotic stimulus	IEP	Neighborhood
BP	GO:0009889	regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0010468	regulation of gene expression	IEP	Neighborhood
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Neighborhood
MF	GO:0016151	nickel cation binding	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Neighborhood
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	Neighborhood
BP	GO:0018298	protein-chromophore linkage	IEP	Neighborhood
MF	GO:0019200	carbohydrate kinase activity	IEP	Neighborhood
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0019222	regulation of metabolic process	IEP	Neighborhood
BP	GO:0019627	urea metabolic process	IEP	Neighborhood
BP	GO:0030001	metal ion transport	IEP	Neighborhood
BP	GO:0031323	regulation of cellular metabolic process	IEP	Neighborhood
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0043419	urea catabolic process	IEP	Neighborhood
MF	GO:0043531	ADP binding	IEP	Neighborhood
BP	GO:0043605	cellular amide catabolic process	IEP	Neighborhood
BP	GO:0044248	cellular catabolic process	IEP	Neighborhood
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	Neighborhood
BP	GO:0044282	small molecule catabolic process	IEP	Neighborhood
CC	GO:0044445	cytosolic part	IEP	Neighborhood
BP	GO:0050789	regulation of biological process	IEP	Neighborhood
BP	GO:0050794	regulation of cellular process	IEP	Neighborhood
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051252	regulation of RNA metabolic process	IEP	Neighborhood
MF	GO:0051536	iron-sulfur cluster binding	IEP	Neighborhood
MF	GO:0051540	metal cluster binding	IEP	Neighborhood
BP	GO:0051606	detection of stimulus	IEP	Neighborhood
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Neighborhood
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	Neighborhood
BP	GO:0065007	biological regulation	IEP	Neighborhood
BP	GO:0071941	nitrogen cycle metabolic process	IEP	Neighborhood
BP	GO:0080090	regulation of primary metabolic process	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood
BP	GO:1901575	organic substance catabolic process	IEP	Neighborhood
CC	GO:1902494	catalytic complex	IEP	Neighborhood
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Neighborhood
CC	GO:1990234	transferase complex	IEP	Neighborhood
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	877	1005
IPR003439	ABC_transporter-like	199	356
IPR013525	ABC_2_trans	511	722
IPR013525	ABC_2_trans	1151	1364
IPR013581	PDR_assoc	727	790

External Links

No external refs found!

AMTR_s00039p00225530 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation