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  5. GSVIVT01017932001

GSVIVT01017932001


Description : Lipid metabolism.lipid degradation.fatty acid degradation.peroxisomal long-chain acyl-CoA synthetase


Gene families : OG0000625 (Archaeplastida) Phylogenetic Tree(s): OG0000625_tree ,
OG_05_0003410 (LandPlants) Phylogenetic Tree(s): OG_05_0003410_tree ,
OG_06_0003589 (SeedPlants) Phylogenetic Tree(s): OG_06_0003589_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017932001
Cluster HCCA: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
AT4G11030 No alias AMP-dependent synthetase and ligase family protein 0.03 Archaeplastida
AT4G23850 LACS4 AMP-dependent synthetase and ligase family protein 0.04 Archaeplastida
Cre12.g507400 No alias Lipid metabolism.lipid degradation.fatty acid... 0.04 Archaeplastida
LOC_Os12g04990.1 No alias peroxisomal long-chain acyl-CoA synthetase 0.04 Archaeplastida
Mp8g16310.1 No alias peroxisomal long-chain acyl-CoA synthetase 0.03 Archaeplastida
Pp3c18_21060V3.1 No alias long-chain acyl-CoA synthetase 7 0.03 Archaeplastida
Pp3c22_7980V3.1 No alias long-chain acyl-CoA synthetase 7 0.05 Archaeplastida
Pp3c3_22420V3.1 No alias AMP-dependent synthetase and ligase family protein 0.02 Archaeplastida
Solyc08g082280.4.1 No alias Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e039185_P005 No alias peroxisomal long-chain acyl-CoA synthetase 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0009916 alternative oxidase activity IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0016832 aldehyde-lyase activity IEP Neighborhood
CC GO:0019008 molybdopterin synthase complex IEP Neighborhood
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Neighborhood
BP GO:0043545 molybdopterin cofactor metabolic process IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0051189 prosthetic group metabolic process IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 109 551
IPR025110 AMP-bd_C 561 603
No external refs found!