GSVIVT01017954001

Description : Polyamine metabolism.putrescine.degradation.diamine oxidase

Gene families : OG0001257 (Archaeplastida) Phylogenetic Tree(s): OG0001257_tree ,
OG_05_0000979 (LandPlants) Phylogenetic Tree(s): OG_05_0000979_tree ,
OG_06_0000765 (SeedPlants) Phylogenetic Tree(s): OG_06_0000765_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01017954001
Cluster	HCCA: Cluster_165

Target	Alias	Description	ECC score	Gene Family Method
AT1G31690	No alias	Copper amine oxidase family protein	0.01	Archaeplastida
AT1G31710	No alias	Copper amine oxidase family protein	0.05	Archaeplastida
AT4G14940	AO1, ATAO1	amine oxidase 1	0.03	Archaeplastida
GSVIVT01017958001	No alias	Polyamine metabolism.putrescine.degradation.diamine oxidase	0.01	Archaeplastida
MA_17966g0020	No alias	Primary amine oxidase 2 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_18326g0010	No alias	copper-containing amine oxidase (CuAO)	0.04	Archaeplastida
Mp8g04340.1	No alias	copper-containing amine oxidase (CuAO)	0.02	Archaeplastida
Solyc09g075930.2.1	No alias	copper-containing amine oxidase (CuAO)	0.04	Archaeplastida
Solyc09g075940.3.1	No alias	copper-containing amine oxidase (CuAO)	0.05	Archaeplastida
Zm00001e010595_P001	No alias	copper-containing amine oxidase (CuAO)	0.03	Archaeplastida
Zm00001e040641_P001	No alias	copper-containing amine oxidase (CuAO)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005507	copper ion binding	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008131	primary amine oxidase activity	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009308	amine metabolic process	IEA	Interproscan
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	None	Extended
MF	GO:0016641	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0048037	cofactor binding	None	Extended
MF	GO:0048038	quinone binding	IEA	Interproscan
BP	GO:0055114	oxidation-reduction process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Neighborhood
MF	GO:0008061	chitin binding	IEP	Neighborhood
BP	GO:0009889	regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0010468	regulation of gene expression	IEP	Neighborhood
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Neighborhood
MF	GO:0015077	monovalent inorganic cation transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015078	proton transmembrane transporter activity	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0019222	regulation of metabolic process	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0022857	transmembrane transporter activity	IEP	Neighborhood
BP	GO:0031323	regulation of cellular metabolic process	IEP	Neighborhood
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Neighborhood
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051252	regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0080090	regulation of primary metabolic process	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR015802	Cu_amine_oxidase_N3	123	218
IPR015800	Cu_amine_oxidase_N2	28	115
IPR015798	Cu_amine_oxidase_C	245	660

External Links

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GSVIVT01017954001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation