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  5. GSVIVT01018024001

GSVIVT01018024001


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS3a component


Gene families : OG0001983 (Archaeplastida) Phylogenetic Tree(s): OG0001983_tree ,
OG_05_0001683 (LandPlants) Phylogenetic Tree(s): OG_05_0001683_tree ,
OG_06_0002405 (SeedPlants) Phylogenetic Tree(s): OG_06_0002405_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01018024001
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00271660 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.08 Archaeplastida
AMTR_s00026p00042160 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 Archaeplastida
AT3G04840 No alias Ribosomal protein S3Ae 0.17 Archaeplastida
AT4G34670 No alias Ribosomal protein S3Ae 0.09 Archaeplastida
Cpa|evm.model.tig00020710.39 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.16 Archaeplastida
Cre13.g568650 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.12 Archaeplastida
Gb_02289 No alias component RPS3a of SSU proteome 0.06 Archaeplastida
LOC_Os02g18550.1 No alias component RPS3a of SSU proteome 0.04 Archaeplastida
LOC_Os03g10340.1 No alias component RPS3a of SSU proteome 0.1 Archaeplastida
LOC_Os12g21798.1 No alias component RPS3a of SSU proteome 0.09 Archaeplastida
MA_124901g0010 No alias component RPS3a of SSU proteome 0.08 Archaeplastida
MA_31004g0010 No alias component RPS3a of SSU proteome 0.04 Archaeplastida
Mp6g02810.1 No alias component RPS3a of SSU proteome 0.15 Archaeplastida
Pp3c11_17260V3.1 No alias Ribosomal protein S3Ae 0.04 Archaeplastida
Pp3c12_18590V3.1 No alias Ribosomal protein S3Ae 0.04 Archaeplastida
Pp3c18_2090V3.1 No alias Ribosomal protein S3Ae 0.1 Archaeplastida
Pp3c21_21510V3.1 No alias Ribosomal protein S3Ae 0.18 Archaeplastida
Pp3c22_18300V3.1 No alias Ribosomal protein S3Ae 0.03 Archaeplastida
Pp3c4_14160V3.1 No alias Ribosomal protein S3Ae 0.07 Archaeplastida
Smo271906 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 Archaeplastida
Solyc03g097900.3.1 No alias component RPS3a of SSU proteome 0.17 Archaeplastida
Solyc06g072490.3.1 No alias component RPS3a of SSU proteome 0.07 Archaeplastida
Solyc09g082520.3.1 No alias component RPS3a of SSU proteome 0.04 Archaeplastida
Zm00001e000767_P001 No alias No annotation 0.05 Archaeplastida
Zm00001e038777_P001 No alias component RPS3a of SSU proteome 0.11 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Neighborhood
CC GO:0000781 chromosome, telomeric region IEP Neighborhood
CC GO:0000784 nuclear chromosome, telomeric region IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
BP GO:0006400 tRNA modification IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
BP GO:0032200 telomere organization IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0060249 anatomical structure homeostasis IEP Neighborhood
CC GO:0098687 chromosomal region IEP Neighborhood
InterPro domains Description Start Stop
IPR001593 Ribosomal_S3Ae 16 221
No external refs found!