Coexpression cluster: Cluster_60 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003735 structural constituent of ribosome 10.81% (20/185) 3.78 0.0 0.0
GO:0043043 peptide biosynthetic process 10.81% (20/185) 3.77 0.0 0.0
GO:0006412 translation 10.81% (20/185) 3.79 0.0 0.0
GO:0006518 peptide metabolic process 10.81% (20/185) 3.73 0.0 0.0
GO:0043604 amide biosynthetic process 10.81% (20/185) 3.73 0.0 0.0
GO:0043228 non-membrane-bounded organelle 11.35% (21/185) 3.69 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 11.35% (21/185) 3.69 0.0 0.0
GO:0005840 ribosome 10.81% (20/185) 3.8 0.0 0.0
GO:0005198 structural molecule activity 10.81% (20/185) 3.71 0.0 0.0
GO:0043603 cellular amide metabolic process 10.81% (20/185) 3.66 0.0 0.0
GO:1990904 ribonucleoprotein complex 10.81% (20/185) 3.63 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 16.22% (30/185) 2.4 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 11.35% (21/185) 3.01 0.0 0.0
GO:0043229 intracellular organelle 12.97% (24/185) 2.73 0.0 0.0
GO:0043226 organelle 12.97% (24/185) 2.73 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 10.81% (20/185) 2.9 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 11.35% (21/185) 2.78 0.0 0.0
GO:0044444 cytoplasmic part 10.81% (20/185) 2.82 0.0 0.0
GO:0032991 protein-containing complex 12.97% (24/185) 2.47 0.0 0.0
GO:0009059 macromolecule biosynthetic process 10.81% (20/185) 2.77 0.0 0.0
GO:0044464 cell part 15.68% (29/185) 2.02 0.0 0.0
GO:0044424 intracellular part 15.14% (28/185) 2.05 0.0 0.0
GO:0009058 biosynthetic process 13.51% (25/185) 2.05 0.0 0.0
GO:0005622 intracellular 5.95% (11/185) 3.44 0.0 0.0
GO:0044249 cellular biosynthetic process 11.35% (21/185) 2.09 0.0 0.0
GO:1901576 organic substance biosynthetic process 11.35% (21/185) 2.0 0.0 1e-06
GO:0003676 nucleic acid binding 12.97% (24/185) 1.51 4e-06 4.5e-05
GO:0044260 cellular macromolecule metabolic process 14.59% (27/185) 1.28 1.7e-05 0.0002
GO:0051276 chromosome organization 2.16% (4/185) 4.57 2.2e-05 0.00025
GO:0003723 RNA binding 4.86% (9/185) 2.45 4.5e-05 0.000487
GO:0006807 nitrogen compound metabolic process 17.3% (32/185) 0.99 0.000137 0.001431
GO:0031390 Ctf18 RFC-like complex 1.08% (2/185) 6.57 0.000146 0.001478
GO:0043170 macromolecule metabolic process 16.22% (30/185) 1.01 0.000185 0.001755
GO:0044267 cellular protein metabolic process 11.35% (21/185) 1.27 0.000179 0.001756
GO:0044237 cellular metabolic process 17.3% (32/185) 0.95 0.000228 0.002105
GO:0007064 mitotic sister chromatid cohesion 1.08% (2/185) 6.15 0.000292 0.002545
GO:0007062 sister chromatid cohesion 1.08% (2/185) 6.15 0.000292 0.002545
GO:0006996 organelle organization 2.16% (4/185) 3.6 0.000332 0.002818
GO:0009987 cellular process 19.46% (36/185) 0.8 0.000621 0.00514
GO:0005575 cellular_component 15.68% (29/185) 0.89 0.000925 0.007472
GO:1903047 mitotic cell cycle process 1.08% (2/185) 5.35 0.001006 0.007928
GO:0044427 chromosomal part 2.16% (4/185) 3.05 0.001425 0.010962
GO:0006259 DNA metabolic process 2.7% (5/185) 2.59 0.001492 0.011205
GO:1901363 heterocyclic compound binding 20.54% (38/185) 0.7 0.001686 0.012105
GO:0097159 organic cyclic compound binding 20.54% (38/185) 0.7 0.001686 0.012105
GO:0008094 DNA-dependent ATPase activity 1.08% (2/185) 4.83 0.002127 0.014933
GO:0003697 single-stranded DNA binding 1.08% (2/185) 4.69 0.002587 0.01778
GO:0090304 nucleic acid metabolic process 4.86% (9/185) 1.59 0.003286 0.022115
GO:1901564 organonitrogen compound metabolic process 12.97% (24/185) 0.85 0.003551 0.023406
GO:0071840 cellular component organization or biogenesis 3.24% (6/185) 2.03 0.003679 0.023764
GO:0019538 protein metabolic process 11.35% (21/185) 0.91 0.003971 0.025149
GO:0006139 nucleobase-containing compound metabolic process 5.41% (10/185) 1.4 0.004893 0.030391
GO:0000781 chromosome, telomeric region 0.54% (1/185) 7.15 0.007022 0.03107
GO:0000723 telomere maintenance 0.54% (1/185) 7.15 0.007022 0.03107
GO:0000784 nuclear chromosome, telomeric region 0.54% (1/185) 7.15 0.007022 0.03107
GO:0032200 telomere organization 0.54% (1/185) 7.15 0.007022 0.03107
GO:0060249 anatomical structure homeostasis 0.54% (1/185) 7.15 0.007022 0.03107
GO:0032299 ribonuclease H2 complex 0.54% (1/185) 7.15 0.007022 0.03107
GO:0008612 peptidyl-lysine modification to peptidyl-hypusine 0.54% (1/185) 7.15 0.007022 0.03107
GO:0003922 GMP synthase (glutamine-hydrolyzing) activity 0.54% (1/185) 7.15 0.007022 0.03107
GO:1901659 glycosyl compound biosynthetic process 0.54% (1/185) 7.15 0.007022 0.03107
GO:0009163 nucleoside biosynthetic process 0.54% (1/185) 7.15 0.007022 0.03107
GO:0042451 purine nucleoside biosynthetic process 0.54% (1/185) 7.15 0.007022 0.03107
GO:0042455 ribonucleoside biosynthetic process 0.54% (1/185) 7.15 0.007022 0.03107
GO:0046037 GMP metabolic process 0.54% (1/185) 7.15 0.007022 0.03107
GO:0046129 purine ribonucleoside biosynthetic process 0.54% (1/185) 7.15 0.007022 0.03107
GO:0006177 GMP biosynthetic process 0.54% (1/185) 7.15 0.007022 0.03107
GO:1901070 guanosine-containing compound biosynthetic process 0.54% (1/185) 7.15 0.007022 0.03107
GO:0004826 phenylalanine-tRNA ligase activity 0.54% (1/185) 7.15 0.007022 0.03107
GO:0022402 cell cycle process 1.08% (2/185) 4.15 0.005516 0.032995
GO:0005488 binding 30.27% (56/185) 0.46 0.00542 0.033031
GO:0019843 rRNA binding 1.08% (2/185) 3.91 0.007753 0.03384
GO:0016874 ligase activity 2.16% (4/185) 2.47 0.006064 0.035611
GO:0044238 primary metabolic process 17.3% (32/185) 0.62 0.00873 0.037599
GO:0001522 pseudouridine synthesis 1.08% (2/185) 3.98 0.006969 0.040194
GO:0006281 DNA repair 1.62% (3/185) 2.78 0.009511 0.04042
GO:0006725 cellular aromatic compound metabolic process 5.41% (10/185) 1.25 0.010051 0.041622
GO:0046483 heterocycle metabolic process 5.41% (10/185) 1.25 0.009942 0.041705
GO:0033554 cellular response to stress 1.62% (3/185) 2.69 0.011275 0.044962
GO:0006974 cellular response to DNA damage stimulus 1.62% (3/185) 2.69 0.011275 0.044962
GO:0051716 cellular response to stimulus 1.62% (3/185) 2.69 0.011275 0.044962
GO:1901360 organic cyclic compound metabolic process 5.41% (10/185) 1.2 0.0123 0.048449
GO:0016043 cellular component organization 2.7% (5/185) 1.86 0.01263 0.049149
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_38 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_39 0.093 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_53 0.044 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_122 0.03 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_134 0.126 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_145 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_166 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_183 0.056 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_207 0.048 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_221 0.029 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_252 0.03 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_50 0.079 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_67 0.03 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_129 0.05 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_144 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_164 0.026 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_172 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_190 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_194 0.031 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_196 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_231 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_249 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_259 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_15 0.117 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_131 0.027 Archaeplastida Compare
Gingko biloba HCCA Cluster_22 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_116 0.047 Archaeplastida Compare
Gingko biloba HCCA Cluster_129 0.067 Archaeplastida Compare
Gingko biloba HCCA Cluster_131 0.029 Archaeplastida Compare
Gingko biloba HCCA Cluster_175 0.025 Archaeplastida Compare
Gingko biloba HCCA Cluster_184 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_323 0.027 Archaeplastida Compare
Gingko biloba HCCA Cluster_335 0.039 Archaeplastida Compare
Gingko biloba HCCA Cluster_337 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_1 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_6 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_7 0.032 Archaeplastida Compare
Zea mays HCCA Cluster_56 0.054 Archaeplastida Compare
Zea mays HCCA Cluster_103 0.028 Archaeplastida Compare
Zea mays HCCA Cluster_122 0.03 Archaeplastida Compare
Zea mays HCCA Cluster_137 0.129 Archaeplastida Compare
Zea mays HCCA Cluster_181 0.028 Archaeplastida Compare
Zea mays HCCA Cluster_216 0.042 Archaeplastida Compare
Zea mays HCCA Cluster_250 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_275 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_276 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_290 0.031 Archaeplastida Compare
Zea mays HCCA Cluster_350 0.042 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_16 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_24 0.023 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_36 0.123 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_84 0.028 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_85 0.022 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_110 0.042 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_115 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_116 0.029 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_125 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_160 0.03 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_19 0.036 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_28 0.105 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_114 0.035 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_121 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_124 0.064 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_135 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_155 0.034 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_167 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_186 0.041 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_192 0.067 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_244 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_248 0.069 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_259 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_290 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_24 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_84 0.079 Archaeplastida Compare
Picea abies HCCA Cluster_93 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_208 0.064 Archaeplastida Compare
Picea abies HCCA Cluster_261 0.032 Archaeplastida Compare
Picea abies HCCA Cluster_296 0.036 Archaeplastida Compare
Picea abies HCCA Cluster_339 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_365 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_486 0.028 Archaeplastida Compare
Picea abies HCCA Cluster_496 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_498 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_522 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_94 0.082 Archaeplastida Compare
Oryza sativa HCCA Cluster_109 0.049 Archaeplastida Compare
Oryza sativa HCCA Cluster_140 0.123 Archaeplastida Compare
Oryza sativa HCCA Cluster_141 0.035 Archaeplastida Compare
Oryza sativa HCCA Cluster_191 0.029 Archaeplastida Compare
Oryza sativa HCCA Cluster_215 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_3 0.05 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_75 0.04 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_88 0.045 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_113 0.043 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_137 0.031 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_148 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_180 0.047 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_32 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_77 0.031 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_86 0.118 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_105 0.057 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_142 0.063 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_173 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_202 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_207 0.037 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_209 0.031 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_222 0.062 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_243 0.029 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_251 0.04 Archaeplastida Compare
Vitis vinifera HCCA Cluster_22 0.042 Archaeplastida Compare
Vitis vinifera HCCA Cluster_69 0.066 Archaeplastida Compare
Vitis vinifera HCCA Cluster_172 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_21 0.024 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_22 0.023 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_25 0.022 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_35 0.078 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_100 0.06 Archaeplastida Compare
Sequences (185) (download table)

InterPro Domains

GO Terms

Family Terms