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  5. GSVIVT01018213001

GSVIVT01018213001


Description : Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT1 alpha subunit


Gene families : OG0004201 (Archaeplastida) Phylogenetic Tree(s): OG0004201_tree ,
OG_05_0004989 (LandPlants) Phylogenetic Tree(s): OG_05_0004989_tree ,
OG_06_0006808 (SeedPlants) Phylogenetic Tree(s): OG_06_0006808_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01018213001
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00139270 evm_27.TU.AmTr_v1... Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 Archaeplastida
AT3G20050 TCP-1, ATTCP-1 T-complex protein 1 alpha subunit 0.15 Archaeplastida
Cpa|evm.model.tig00021350.16 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 Archaeplastida
Cre10.g439100 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.06 Archaeplastida
Gb_09465 No alias CCT1 subunit alpha of CCT chaperonin folding complex 0.04 Archaeplastida
LOC_Os04g46620.1 No alias CCT1 subunit alpha of CCT chaperonin folding complex 0.11 Archaeplastida
MA_117961g0010 No alias T-complex protein 1 subunit alpha OS=Arabidopsis... 0.02 Archaeplastida
MA_21256g0010 No alias CCT1 subunit alpha of CCT chaperonin folding complex 0.09 Archaeplastida
Mp7g01530.1 No alias CCT1 subunit alpha of CCT chaperonin folding complex 0.05 Archaeplastida
Pp3c11_2110V3.1 No alias T-complex protein 1 alpha subunit 0.03 Archaeplastida
Pp3c7_24640V3.1 No alias T-complex protein 1 alpha subunit 0.05 Archaeplastida
Smo167342 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 Archaeplastida
Solyc01g090750.3.1 No alias CCT1 subunit alpha of CCT chaperonin folding complex 0.08 Archaeplastida
Zm00001e016095_P001 No alias CCT1 subunit alpha of CCT chaperonin folding complex 0.07 Archaeplastida
Zm00001e023719_P001 No alias CCT1 subunit alpha of CCT chaperonin folding complex 0.1 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
CC GO:0000776 kinetochore IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
BP GO:0006177 GMP biosynthetic process IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0009119 ribonucleoside metabolic process IEP Neighborhood
BP GO:0009163 nucleoside biosynthetic process IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
BP GO:0030259 lipid glycosylation IEP Neighborhood
CC GO:0031262 Ndc80 complex IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0042278 purine nucleoside metabolic process IEP Neighborhood
BP GO:0042451 purine nucleoside biosynthetic process IEP Neighborhood
BP GO:0042455 ribonucleoside biosynthetic process IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0046037 GMP metabolic process IEP Neighborhood
BP GO:0046128 purine ribonucleoside metabolic process IEP Neighborhood
BP GO:0046129 purine ribonucleoside biosynthetic process IEP Neighborhood
BP GO:1901068 guanosine-containing compound metabolic process IEP Neighborhood
BP GO:1901070 guanosine-containing compound biosynthetic process IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
BP GO:1901659 glycosyl compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 31 536
No external refs found!