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  5. GSVIVT01018538001

GSVIVT01018538001


Description : 3-ketoacyl-CoA synthase 5 OS=Arabidopsis thaliana


Gene families : OG0000123 (Archaeplastida) Phylogenetic Tree(s): OG0000123_tree ,
OG_05_0017313 (LandPlants) Phylogenetic Tree(s): OG_05_0017313_tree ,
OG_06_0016828 (SeedPlants) Phylogenetic Tree(s): OG_06_0016828_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01018538001
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00268740 evm_27.TU.AmTr_v1... Lipid metabolism.fatty acid synthesis.fatty acid... 0.05 Archaeplastida
AMTR_s00007p00267760 evm_27.TU.AmTr_v1... Lipid metabolism.fatty acid synthesis.fatty acid... 0.05 Archaeplastida
AMTR_s00069p00182480 evm_27.TU.AmTr_v1... Lipid metabolism.fatty acid synthesis.fatty acid... 0.02 Archaeplastida
AT1G25450 KCS5, CER60 3-ketoacyl-CoA synthase 5 0.05 Archaeplastida
AT4G34510 KCS17 3-ketoacyl-CoA synthase 17 0.04 Archaeplastida
GSVIVT01005975001 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.02 Archaeplastida
GSVIVT01013708001 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.08 Archaeplastida
GSVIVT01018539001 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.05 Archaeplastida
GSVIVT01025052001 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.04 Archaeplastida
LOC_Os10g33370.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
MA_10605g0020 No alias 3-ketoacyl-CoA synthase (KCS) 0.04 Archaeplastida
MA_11217g0010 No alias 3-ketoacyl-CoA synthase (KCS) 0.04 Archaeplastida
MA_415118g0020 No alias 3-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_43136g0010 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
MA_759169g0010 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
Mp1g06080.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.02 Archaeplastida
Pp3c1_26250V3.1 No alias 3-ketoacyl-CoA synthase 11 0.02 Archaeplastida
Pp3c2_16180V3.1 No alias 3-ketoacyl-CoA synthase 11 0.09 Archaeplastida
Pp3c3_31430V3.1 No alias 3-ketoacyl-CoA synthase 4 0.02 Archaeplastida
Smo79947 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.02 Archaeplastida
Solyc02g063140.4.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
Solyc02g085870.3.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.05 Archaeplastida
Solyc03g005320.3.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.05 Archaeplastida
Solyc05g009280.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g053870.4.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.04 Archaeplastida
Solyc09g083050.3.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.04 Archaeplastida
Solyc10g009240.3.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.04 Archaeplastida
Solyc11g072990.1.1 No alias 3-ketoacyl-CoA synthase (KCS) 0.05 Archaeplastida
Zm00001e002667_P002 No alias 3-ketoacyl-CoA synthase (KCS) 0.04 Archaeplastida
Zm00001e012803_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.04 Archaeplastida
Zm00001e034732_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida
Zm00001e038586_P001 No alias 3-ketoacyl-CoA synthase (KCS) 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006633 fatty acid biosynthetic process IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
InterPro domains Description Start Stop
IPR013747 ACP_syn_III_C 355 436
IPR013601 FAE1_typ3_polyketide_synth 84 220
IPR013601 FAE1_typ3_polyketide_synth 221 335
No external refs found!