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  5. GSVIVT01019119001

GSVIVT01019119001


Description : RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor


Gene families : OG0000421 (Archaeplastida) Phylogenetic Tree(s): OG0000421_tree ,
OG_05_0000820 (LandPlants) Phylogenetic Tree(s): OG_05_0000820_tree ,
OG_06_0002308 (SeedPlants) Phylogenetic Tree(s): OG_06_0002308_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01019119001
Cluster HCCA: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
MA_137427g0010 No alias C3H zinc finger transcription factor 0.03 Archaeplastida
Pp3c26_12270V3.1 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.03 Archaeplastida
Pp3c4_29750V3.1 No alias zinc finger protein 1 0.02 Archaeplastida
Zm00001e017266_P001 No alias C3H zinc finger transcription factor 0.03 Archaeplastida
Zm00001e017267_P001 No alias C3H zinc finger transcription factor 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 57 79
IPR000571 Znf_CCCH 13 33
IPR000571 Znf_CCCH 240 265
IPR000571 Znf_CCCH 194 219
No external refs found!