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  5. GSVIVT01019351001

GSVIVT01019351001


Description : Putative disease resistance protein RGA4 OS=Solanum bulbocastanum


Gene families : OG0000215 (Archaeplastida) Phylogenetic Tree(s): OG0000215_tree ,
OG_05_0000100 (LandPlants) Phylogenetic Tree(s): OG_05_0000100_tree ,
OG_06_0000046 (SeedPlants) Phylogenetic Tree(s): OG_06_0000046_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01019351001
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AT3G14470 No alias NB-ARC domain-containing disease resistance protein 0.03 Archaeplastida
GSVIVT01001399001 No alias G-type lectin S-receptor-like serine/threonine-protein... 0.03 Archaeplastida
GSVIVT01005320001 No alias Putative disease resistance RPP13-like protein 1... 0.03 Archaeplastida
GSVIVT01007029001 No alias Putative disease resistance RPP13-like protein 1... 0.01 Archaeplastida
GSVIVT01013310001 No alias Putative disease resistance RPP13-like protein 1... 0.02 Archaeplastida
GSVIVT01013533001 No alias Putative disease resistance RPP13-like protein 1... 0.02 Archaeplastida
GSVIVT01022856001 No alias Putative disease resistance RPP13-like protein 1... 0.03 Archaeplastida
GSVIVT01022937001 No alias Putative disease resistance RPP13-like protein 1... 0.01 Archaeplastida
GSVIVT01022939001 No alias Putative disease resistance RPP13-like protein 1... 0.01 Archaeplastida
GSVIVT01026092001 No alias Putative disease resistance RPP13-like protein 1... 0.04 Archaeplastida
GSVIVT01031998001 No alias Putative disease resistance protein At3g14460... 0.03 Archaeplastida
GSVIVT01032204001 No alias Putative disease resistance protein RGA4 OS=Solanum bulbocastanum 0.04 Archaeplastida
GSVIVT01036657001 No alias Putative disease resistance RPP13-like protein 1... 0.07 Archaeplastida
LOC_Os03g20840.1 No alias Putative disease resistance protein RGA4 OS=Solanum... 0.02 Archaeplastida
LOC_Os06g47800.1 No alias Putative disease resistance protein RGA1 OS=Solanum... 0.03 Archaeplastida
LOC_Os07g17220.1 No alias Putative disease resistance protein At3g14460... 0.02 Archaeplastida
LOC_Os08g43000.1 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.03 Archaeplastida
LOC_Os08g43010.1 No alias Putative disease resistance protein RGA1 OS=Solanum... 0.03 Archaeplastida
LOC_Os09g14490.1 No alias Putative disease resistance RPP13-like protein 1... 0.03 Archaeplastida
Zm00001e031999_P001 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002182 NB-ARC 3 155
IPR001611 Leu-rich_rpt 313 366
No external refs found!