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  5. GSVIVT01019655001

GSVIVT01019655001


Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.HD-ZIP I/II transcription factor


Gene families : OG0000146 (Archaeplastida) Phylogenetic Tree(s): OG0000146_tree ,
OG_05_0000061 (LandPlants) Phylogenetic Tree(s): OG_05_0000061_tree ,
OG_06_0000101 (SeedPlants) Phylogenetic Tree(s): OG_06_0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01019655001
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00141510 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
AT2G22430 HB6, ATHB6 homeobox protein 6 0.04 Archaeplastida
AT2G46680 HB-7, ATHB-7, ATHB7 homeobox 7 0.04 Archaeplastida
AT3G61890 HB-12, ATHB-12, ATHB12 homeobox 12 0.06 Archaeplastida
AT4G36740 ATHB40, HB40, HB-5 homeobox protein 40 0.06 Archaeplastida
AT4G40060 ATHB16, HB16, ATHB-16 homeobox protein 16 0.03 Archaeplastida
AT5G15150 ATHB3, HB-3, ATHB-3, HAT7 homeobox 3 0.03 Archaeplastida
Gb_02323 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Gb_07209 No alias Homeobox-leucine zipper protein HAT7 OS=Arabidopsis... 0.03 Archaeplastida
Gb_35116 No alias transcription factor (HD-ZIP I/II) 0.05 Archaeplastida
Gb_35959 No alias transcription factor (HD-ZIP I/II) 0.08 Archaeplastida
Gb_39722 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
LOC_Os02g43330.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
LOC_Os02g49700.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
LOC_Os03g07450.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
LOC_Os03g10210.1 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
LOC_Os07g39320.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
LOC_Os08g32080.1 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
LOC_Os08g32085.1 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
LOC_Os09g35910.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
LOC_Os10g23090.1 No alias transcription factor (HD-ZIP I/II) 0.05 Archaeplastida
LOC_Os10g26500.1 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
MA_132936g0010 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
MA_19453g0050 No alias Homeobox-leucine zipper protein HAT5 OS=Arabidopsis... 0.02 Archaeplastida
MA_238039g0010 No alias transcription factor (HD-ZIP I/II) 0.02 Archaeplastida
MA_3951g0010 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Mp3g02320.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Pp3c11_23440V3.1 No alias homeobox 1 0.02 Archaeplastida
Pp3c12_21760V3.1 No alias homeobox protein 16 0.02 Archaeplastida
Pp3c17_18190V3.1 No alias homeobox protein 16 0.03 Archaeplastida
Pp3c1_37070V3.1 No alias homeobox protein 16 0.03 Archaeplastida
Pp3c25_13450V3.1 No alias homeobox 1 0.03 Archaeplastida
Pp3c2_4940V3.1 No alias Homeobox-leucine zipper protein family 0.04 Archaeplastida
Pp3c7_2100V3.1 No alias Homeobox-leucine zipper protein family 0.02 Archaeplastida
Pp3c8_440V3.1 No alias homeobox 3 0.04 Archaeplastida
Solyc01g096320.3.1 No alias transcription factor (HD-ZIP I/II) 0.05 Archaeplastida
Solyc02g085630.3.1 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
Solyc03g082550.3.1 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
Solyc04g005800.3.1 No alias transcription factor (HD-ZIP I/II) 0.06 Archaeplastida
Solyc05g006980.3.1 No alias transcription factor (HD-ZIP I/II) 0.05 Archaeplastida
Solyc05g051460.3.1 No alias transcription factor (HD-ZIP I/II) 0.05 Archaeplastida
Solyc06g053220.3.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Solyc08g083130.4.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Zm00001e010004_P002 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
Zm00001e010218_P001 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Zm00001e015274_P001 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Zm00001e015717_P003 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003106 Leu_zip_homeo 100 141
IPR001356 Homeobox_dom 46 98
No external refs found!