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  5. GSVIVT01019855001

GSVIVT01019855001


Description : Probable transcriptional regulator SLK2 OS=Arabidopsis thaliana


Gene families : OG0001132 (Archaeplastida) Phylogenetic Tree(s): OG0001132_tree ,
OG_05_0001403 (LandPlants) Phylogenetic Tree(s): OG_05_0001403_tree ,
OG_06_0001294 (SeedPlants) Phylogenetic Tree(s): OG_06_0001294_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01019855001
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
AT5G62090 SLK2 SEUSS-like 2 0.03 Archaeplastida
Pp3c16_1990V3.1 No alias SEUSS transcriptional co-regulator 0.02 Archaeplastida
Pp3c25_7810V3.1 No alias SEUSS transcriptional co-regulator 0.02 Archaeplastida
Pp3c4_30018V3.1 No alias No annotation 0.02 Archaeplastida
Solyc11g005990.2.1 No alias Transcriptional corepressor SEUSS OS=Arabidopsis... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006808 regulation of nitrogen utilization IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019915 lipid storage IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR029005 LIM-bd/SEUSS 203 463
No external refs found!