GSVIVT01019875001

Description : Secondary metabolism.terpenoids.mevalonate pathway.3-hydroxy-3-methylglutaryl-CoA synthase

Gene families : OG0002042 (Archaeplastida) Phylogenetic Tree(s): OG0002042_tree ,
OG_05_0002447 (LandPlants) Phylogenetic Tree(s): OG_05_0002447_tree ,
OG_06_0002351 (SeedPlants) Phylogenetic Tree(s): OG_06_0002351_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01019875001
Cluster	HCCA: Cluster_232

Target	Alias	Description	ECC score	Gene Family Method
AT4G11820	FKP1, EMB2778, MVA1, HMGS	hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase /...	0.05	Archaeplastida
Gb_11300	No alias	3-hydroxy-3-methylglutaryl-CoA synthase	0.03	Archaeplastida
Gb_11303	No alias	3-hydroxy-3-methylglutaryl-CoA synthase	0.04	Archaeplastida
Gb_11304	No alias	3-hydroxy-3-methylglutaryl-CoA synthase	0.03	Archaeplastida
Gb_16306	No alias	3-hydroxy-3-methylglutaryl-CoA synthase	0.03	Archaeplastida
MA_101113g0020	No alias	3-hydroxy-3-methylglutaryl-CoA synthase	0.03	Archaeplastida
Mp4g22640.1	No alias	3-hydroxy-3-methylglutaryl-CoA synthase	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004421	hydroxymethylglutaryl-CoA synthase activity	IEA	Interproscan
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	IEA	Interproscan
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	transferase activity, transferring acyl groups	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
MF	GO:0046912	transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	Neighborhood
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0003743	translation initiation factor activity	IEP	Neighborhood
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Neighborhood
MF	GO:0005102	signaling receptor binding	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
BP	GO:0006413	translational initiation	IEP	Neighborhood
MF	GO:0008083	growth factor activity	IEP	Neighborhood
MF	GO:0008135	translation factor activity, RNA binding	IEP	Neighborhood
BP	GO:0008283	cell proliferation	IEP	Neighborhood
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016859	cis-trans isomerase activity	IEP	Neighborhood
BP	GO:0018193	peptidyl-amino acid modification	IEP	Neighborhood
BP	GO:0018208	peptidyl-proline modification	IEP	Neighborhood
MF	GO:0030545	receptor regulator activity	IEP	Neighborhood
CC	GO:0043227	membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Neighborhood
MF	GO:0048018	receptor ligand activity	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR013746	HMG_CoA_synt_C_dom	175	449
IPR013528	HMG_CoA_synth_N	2	174

External Links

No external refs found!