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  5. GSVIVT01020657001

GSVIVT01020657001


Description : Probable cysteine protease RD21B OS=Arabidopsis thaliana


Gene families : OG0000108 (Archaeplastida) Phylogenetic Tree(s): OG0000108_tree ,
OG_05_0020750 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0020012 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01020657001
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00178750 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.05 Archaeplastida
AMTR_s00022p00165270 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.03 Archaeplastida
AMTR_s00049p00133800 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.04 Archaeplastida
AMTR_s00061p00214890 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.03 Archaeplastida
AMTR_s00061p00215070 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.03 Archaeplastida
AMTR_s00061p00215230 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.03 Archaeplastida
AMTR_s00061p00215400 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.03 Archaeplastida
AT1G20850 XCP2 xylem cysteine peptidase 2 0.03 Archaeplastida
AT1G29090 No alias Cysteine proteinases superfamily protein 0.03 Archaeplastida
AT2G34080 No alias Cysteine proteinases superfamily protein 0.02 Archaeplastida
AT3G19390 No alias Granulin repeat cysteine protease family protein 0.03 Archaeplastida
AT3G43960 No alias Cysteine proteinases superfamily protein 0.03 Archaeplastida
AT3G48340 No alias Cysteine proteinases superfamily protein 0.03 Archaeplastida
AT4G23520 No alias Cysteine proteinases superfamily protein 0.03 Archaeplastida
AT4G35350 XCP1 xylem cysteine peptidase 1 0.03 Archaeplastida
AT5G45890 SAG12 senescence-associated gene 12 0.05 Archaeplastida
AT5G50260 No alias Cysteine proteinases superfamily protein 0.04 Archaeplastida
Cre09.g407700 No alias Cysteine proteinase RD21A OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01013420001 No alias Protein degradation.peptidase families.cysteine-type... 0.04 Archaeplastida
GSVIVT01021223001 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01023863001 No alias Protein degradation.peptidase families.cysteine-type... 0.04 Archaeplastida
Gb_10444 No alias protease (Papain) 0.04 Archaeplastida
Gb_19399 No alias Prgrammed Cell Death cysteine protease (XCP) 0.04 Archaeplastida
LOC_Os01g67980.1 No alias protease (Papain) 0.03 Archaeplastida
LOC_Os04g13090.1 No alias protease (Papain) 0.03 Archaeplastida
LOC_Os05g01810.1 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.03 Archaeplastida
LOC_Os08g44270.1 No alias protease (Papain) 0.03 Archaeplastida
LOC_Os09g32230.1 No alias Senescence-specific cysteine protease SAG12... 0.06 Archaeplastida
LOC_Os09g38920.1 No alias Senescence-specific cysteine protease SAG12... 0.02 Archaeplastida
LOC_Os11g14900.4 No alias protease (Papain) 0.03 Archaeplastida
MA_10425982g0010 No alias Cysteine protease XCP1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10429635g0010 No alias Cysteine protease XCP1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10433090g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_34759g0010 No alias Thiol protease SEN102 OS=Hemerocallis sp.... 0.03 Archaeplastida
Mp1g01840.1 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c21_12340V3.1 No alias Granulin repeat cysteine protease family protein 0.02 Archaeplastida
Smo139792 No alias Caricain OS=Carica papaya 0.02 Archaeplastida
Solyc02g076980.5.1.1 No alias Senescence-specific cysteine protease SAG12... 0.04 Archaeplastida
Solyc02g077040.4.1 No alias Senescence-specific cysteine protease SAG12... 0.03 Archaeplastida
Solyc03g111730.3.1 No alias protease (Papain) 0.05 Archaeplastida
Solyc04g078540.4.1 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana... 0.01 Archaeplastida
Solyc04g082710.4.1 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.04 Archaeplastida
Solyc07g053460.4.1 No alias Senescence-specific cysteine protease SAG12... 0.03 Archaeplastida
Solyc12g094700.3.1 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.04 Archaeplastida
Zm00001e003949_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e010091_P001 No alias Senescence-specific cysteine protease SAG12... 0.06 Archaeplastida
Zm00001e021376_P001 No alias no hits & (original description: none) 0.01 Archaeplastida
Zm00001e028260_P001 No alias Cysteine protease XCP2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e029667_P001 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.04 Archaeplastida
Zm00001e030283_P001 No alias Oryzain alpha chain OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004478 methionine adenosyltransferase activity IEP Neighborhood
MF GO:0004506 squalene monooxygenase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0046500 S-adenosylmethionine metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000668 Peptidase_C1A_C 125 341
IPR013201 Prot_inhib_I29 41 97
No external refs found!