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  5. GSVIVT01020727001

GSVIVT01020727001


Description : Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.large subunit proteome.mtRPL1 component


Gene families : OG0001793 (Archaeplastida) Phylogenetic Tree(s): OG0001793_tree ,
OG_05_0007821 (LandPlants) Phylogenetic Tree(s): OG_05_0007821_tree ,
OG_06_0007898 (SeedPlants) Phylogenetic Tree(s): OG_06_0007898_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01020727001
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00107p00035950 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.01 Archaeplastida
AT2G42710 No alias Ribosomal protein L1p/L10e family 0.03 Archaeplastida
AT3G63490 No alias Ribosomal protein L1p/L10e family 0.02 Archaeplastida
Cpa|evm.model.tig00021357.72 No alias 50S ribosomal protein L1, chloroplastic OS=Spinacia oleracea 0.01 Archaeplastida
Cre02.g088900 No alias Protein biosynthesis.organelle translation... 0.01 Archaeplastida
Cre06.g278090 No alias 50S ribosomal protein L1, chloroplastic OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_26914 No alias component mtRPL1 of large ribosomal subunit proteome 0.01 Archaeplastida
LOC_Os06g35470.1 No alias component mtRPL1 of large ribosomal subunit proteome 0.03 Archaeplastida
MA_10112138g0010 No alias 50S ribosomal protein L1, chloroplastic OS=Spinacia... 0.03 Archaeplastida
Mp1g07500.1 No alias component psRPL1 of large ribosomal subunit proteome 0.02 Archaeplastida
Solyc01g087730.4.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc12g013990.3.1 No alias component mtRPL1 of large ribosomal subunit proteome 0.01 Archaeplastida
Zm00001e037138_P001 No alias component mtRPL1 of large ribosomal subunit proteome 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR028364 Ribosomal_L1/biogenesis 55 252
No external refs found!