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  5. GSVIVT01020760001

GSVIVT01020760001


Description : Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH1/2/5/6/8 component


Gene families : OG0000346 (Archaeplastida) Phylogenetic Tree(s): OG0000346_tree ,
OG_05_0002814 (LandPlants) Phylogenetic Tree(s): OG_05_0002814_tree ,
OG_06_0014976 (SeedPlants) Phylogenetic Tree(s): OG_06_0014976_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01020760001
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00232760 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.metallopeptidase... 0.06 Archaeplastida
AMTR_s00106p00108310 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.metallopeptidase... 0.08 Archaeplastida
AT1G50250 FTSH1 FTSH protease 1 0.05 Archaeplastida
AT5G42270 FTSH5, VAR1 FtsH extracellular protease family 0.09 Archaeplastida
Cpa|evm.model.tig00000704.23 No alias ATP-dependent zinc metalloprotease FTSH 1, chloroplastic... 0.01 Archaeplastida
Cre12.g485800 No alias Protein degradation.peptidase families.metallopeptidase... 0.03 Archaeplastida
Cre17.g720050 No alias Protein degradation.peptidase families.metallopeptidase... 0.05 Archaeplastida
Gb_06887 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.05 Archaeplastida
Gb_12830 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.07 Archaeplastida
Gb_32360 No alias component FtsHi of protein translocation ATPase motor complex 0.02 Archaeplastida
LOC_Os06g45820.1 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.1 Archaeplastida
LOC_Os06g51029.1 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.08 Archaeplastida
MA_188257g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_98203g0010 No alias No annotation 0.07 Archaeplastida
Mp3g08790.1 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.03 Archaeplastida
Mp4g19200.1 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.07 Archaeplastida
Pp3c12_22830V3.1 No alias FtsH extracellular protease family 0.06 Archaeplastida
Pp3c20_15780V3.1 No alias FtsH extracellular protease family 0.07 Archaeplastida
Pp3c20_5760V3.1 No alias FtsH extracellular protease family 0.03 Archaeplastida
Pp3c22_8480V3.1 No alias FtsH extracellular protease family 0.03 Archaeplastida
Pp3c23_14665V3.1 No alias FtsH extracellular protease family 0.06 Archaeplastida
Pp3c23_8400V3.1 No alias FtsH extracellular protease family 0.09 Archaeplastida
Smo139726 No alias Protein degradation.peptidase families.metallopeptidase... 0.05 Archaeplastida
Smo149856 No alias Protein degradation.peptidase families.metallopeptidase... 0.02 Archaeplastida
Smo152929 No alias Protein degradation.peptidase families.metallopeptidase... 0.02 Archaeplastida
Solyc04g082250.3.1 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.07 Archaeplastida
Solyc07g055320.4.1 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.1 Archaeplastida
Zm00001e007868_P001 No alias component FtsHi of protein translocation ATPase motor complex 0.05 Archaeplastida
Zm00001e030153_P001 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.06 Archaeplastida
Zm00001e030358_P003 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.11 Archaeplastida
Zm00001e037753_P001 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Neighborhood
MF GO:0004813 alanine-tRNA ligase activity IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
BP GO:0006419 alanyl-tRNA aminoacylation IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016832 aldehyde-lyase activity IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0017004 cytochrome complex assembly IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0032977 membrane insertase activity IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR000642 Peptidase_M41 121 310
IPR003959 ATPase_AAA_core 1 38
No external refs found!