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  5. GSVIVT01020924001

GSVIVT01020924001


Description : Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase


Gene families : OG0002980 (Archaeplastida) Phylogenetic Tree(s): OG0002980_tree ,
OG_05_0003155 (LandPlants) Phylogenetic Tree(s): OG_05_0003155_tree ,
OG_06_0003494 (SeedPlants) Phylogenetic Tree(s): OG_06_0003494_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01020924001
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00209p00023450 evm_27.TU.AmTr_v1... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 Archaeplastida
AT4G13780 No alias methionine--tRNA ligase, putative / methionyl-tRNA... 0.05 Archaeplastida
Cre02.g087950 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 Archaeplastida
LOC_Os06g31210.1 No alias methionine-tRNA ligase 0.04 Archaeplastida
MA_10427001g0020 No alias Probable methionine--tRNA ligase OS=Oryza sativa subsp.... 0.03 Archaeplastida
MA_10436199g0010 No alias methionine-tRNA ligase 0.04 Archaeplastida
Pp3c13_2300V3.1 No alias methionine--tRNA ligase, putative / methionyl-tRNA... 0.03 Archaeplastida
Smo164891 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 Archaeplastida
Zm00001e000847_P001 No alias methionine-tRNA ligase 0.05 Archaeplastida
Zm00001e038714_P001 No alias methionine-tRNA ligase 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043015 gamma-tubulin binding IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR015413 Methionyl/Leucyl_tRNA_Synth 25 419
IPR002547 tRNA-bd_dom 793 887
No external refs found!