GSVIVT01021086001

Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.DOF transcription factor

Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0031611 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01021086001
Cluster	HCCA: Cluster_228

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00033p00212490	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	Archaeplastida
AMTR_s00058p00210070	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	Archaeplastida
AMTR_s00059p00213350	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
AMTR_s00069p00049300	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	Archaeplastida
AMTR_s00119p00099150	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
AMTR_s00160p00046100	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.04	Archaeplastida
AT1G07640	OBP2	Dof-type zinc finger DNA-binding family protein	0.02	Archaeplastida
AT1G47655	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Archaeplastida
AT1G69570	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Archaeplastida
AT2G28510	No alias	Dof-type zinc finger DNA-binding family protein	0.05	Archaeplastida
AT2G28810	No alias	Dof-type zinc finger DNA-binding family protein	0.04	Archaeplastida
AT2G34140	No alias	Dof-type zinc finger DNA-binding family protein	0.04	Archaeplastida
AT2G46590	DAG2	Dof-type zinc finger DNA-binding family protein	0.06	Archaeplastida
AT3G21270	ADOF2, DOF2	DOF zinc finger protein 2	0.02	Archaeplastida
AT3G47500	CDF3	cycling DOF factor 3	0.03	Archaeplastida
AT3G55370	OBP3	OBF-binding protein 3	0.04	Archaeplastida
AT3G61850	DAG1	Dof-type zinc finger DNA-binding family protein	0.05	Archaeplastida
AT4G24060	No alias	Dof-type zinc finger DNA-binding family protein	0.04	Archaeplastida
AT5G02460	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Archaeplastida
AT5G60200	TMO6	TARGET OF MONOPTEROS 6	0.03	Archaeplastida
Gb_20144	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os01g48290.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os02g45200.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os03g16850.1	No alias	transcription factor (DOF)	0.05	Archaeplastida
LOC_Os03g38870.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os03g55610.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os03g60630.1	No alias	transcription factor (DOF)	0.06	Archaeplastida
LOC_Os04g47990.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
LOC_Os07g13260.1	No alias	transcription factor (DOF)	0.07	Archaeplastida
LOC_Os07g32510.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
LOC_Os07g48570.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os10g26620.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
MA_46520g0010	No alias	transcription factor (DOF)	0.03	Archaeplastida
MA_52474g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
Mp2g20790.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Pp3c13_2000V3.1	No alias	cycling DOF factor 3	0.03	Archaeplastida
Pp3c17_23300V3.1	No alias	cycling DOF factor 3	0.02	Archaeplastida
Pp3c3_26370V3.1	No alias	cycling DOF factor 3	0.02	Archaeplastida
Pp3c9_4910V3.1	No alias	cycling DOF factor 2	0.03	Archaeplastida
Solyc01g096120.3.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Solyc02g077950.3.1	No alias	transcription factor (DOF)	0.07	Archaeplastida
Solyc02g077960.3.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Solyc02g078620.1.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
Solyc03g115940.4.1	No alias	transcription factor (DOF)	0.05	Archaeplastida
Solyc06g071480.3.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Solyc08g082910.2.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Solyc09g010680.3.1	No alias	transcription factor (DOF)	0.05	Archaeplastida
Solyc10g009360.4.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Solyc10g086440.2.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Solyc11g072500.2.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e000526_P001	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e003086_P001	No alias	transcription factor (DOF)	0.02	Archaeplastida
Zm00001e004476_P002	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e005107_P001	No alias	transcription factor (DOF)	0.05	Archaeplastida
Zm00001e005785_P001	No alias	transcription factor (DOF)	0.05	Archaeplastida
Zm00001e006190_P001	No alias	transcription factor (DOF)	0.06	Archaeplastida
Zm00001e010454_P001	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e011750_P002	No alias	transcription factor (DOF)	0.05	Archaeplastida
Zm00001e015414_P004	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e015597_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e023218_P004	No alias	transcription factor (DOF)	0.07	Archaeplastida
Zm00001e027634_P002	No alias	transcription factor (DOF)	0.05	Archaeplastida
Zm00001e028672_P001	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e029641_P001	No alias	transcription factor (DOF)	0.05	Archaeplastida
Zm00001e035074_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e038479_P002	No alias	transcription factor (DOF)	0.02	Archaeplastida
Zm00001e041444_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e041944_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	Neighborhood
MF	GO:0004222	metalloendopeptidase activity	IEP	Neighborhood
MF	GO:0004650	polygalacturonase activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
BP	GO:0006820	anion transport	IEP	Neighborhood
BP	GO:0008272	sulfate transport	IEP	Neighborhood
MF	GO:0008509	anion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015116	sulfate transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015698	inorganic anion transport	IEP	Neighborhood
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood
MF	GO:0050664	oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor	IEP	Neighborhood
BP	GO:0072348	sulfur compound transport	IEP	Neighborhood
MF	GO:1901682	sulfur compound transmembrane transporter activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	108	164

External Links

No external refs found!

GSVIVT01021086001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation