AMTR_s00040p00230890 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00040.279

Description : PHD finger protein EHD3 OS=Oryza sativa subsp. japonica


Gene families : OG0005226 (Archaeplastida) Phylogenetic Tree(s): OG0005226_tree ,
OG_05_0003398 (LandPlants) Phylogenetic Tree(s): OG_05_0003398_tree ,
OG_06_0003778 (SeedPlants) Phylogenetic Tree(s): OG_06_0003778_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00040p00230890
Cluster HCCA: Cluster_12


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0001505 regulation of neurotransmitter levels IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0004146 dihydrofolate reductase activity IEP Neighborhood
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Neighborhood
MF GO:0004799 thymidylate synthase activity IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Neighborhood
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Neighborhood
BP GO:0006231 dTMP biosynthetic process IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
BP GO:0006497 protein lipidation IEP Neighborhood
BP GO:0006505 GPI anchor metabolic process IEP Neighborhood
BP GO:0006506 GPI anchor biosynthetic process IEP Neighborhood
BP GO:0006544 glycine metabolic process IEP Neighborhood
BP GO:0006545 glycine biosynthetic process IEP Neighborhood
BP GO:0006575 cellular modified amino acid metabolic process IEP Neighborhood
BP GO:0006643 membrane lipid metabolic process IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Neighborhood
BP GO:0006664 glycolipid metabolic process IEP Neighborhood
BP GO:0006760 folic acid-containing compound metabolic process IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
BP GO:0008654 phospholipid biosynthetic process IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0009070 serine family amino acid biosynthetic process IEP Neighborhood
BP GO:0009129 pyrimidine nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009130 pyrimidine nucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009157 deoxyribonucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009162 deoxyribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009176 pyrimidine deoxyribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009177 pyrimidine deoxyribonucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009219 pyrimidine deoxyribonucleotide metabolic process IEP Neighborhood
BP GO:0009221 pyrimidine deoxyribonucleotide biosynthetic process IEP Neighborhood
BP GO:0009247 glycolipid biosynthetic process IEP Neighborhood
BP GO:0009262 deoxyribonucleotide metabolic process IEP Neighborhood
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Neighborhood
BP GO:0009265 2'-deoxyribonucleotide biosynthetic process IEP Neighborhood
BP GO:0009394 2'-deoxyribonucleotide metabolic process IEP Neighborhood
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016149 translation release factor activity, codon specific IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0019637 organophosphate metabolic process IEP Neighborhood
BP GO:0019692 deoxyribose phosphate metabolic process IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
MF GO:0042083 5,10-methylenetetrahydrofolate-dependent methyltransferase activity IEP Neighborhood
BP GO:0042133 neurotransmitter metabolic process IEP Neighborhood
BP GO:0042136 neurotransmitter biosynthetic process IEP Neighborhood
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Neighborhood
BP GO:0042558 pteridine-containing compound metabolic process IEP Neighborhood
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0045017 glycerolipid biosynthetic process IEP Neighborhood
BP GO:0046073 dTMP metabolic process IEP Neighborhood
BP GO:0046385 deoxyribose phosphate biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0046467 membrane lipid biosynthetic process IEP Neighborhood
BP GO:0046474 glycerophospholipid biosynthetic process IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Neighborhood
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Neighborhood
BP GO:0090407 organophosphate biosynthetic process IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
BP GO:1903509 liposaccharide metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 724 756
IPR019787 Znf_PHD-finger 525 573
No external refs found!