GSVIVT01022278001

Description : Nucleotide metabolism.deoxynucleotide metabolism.ribonucleoside-diphosphate reductase dimer.large subunit

Gene families : OG0002474 (Archaeplastida) Phylogenetic Tree(s): OG0002474_tree ,
OG_05_0003602 (LandPlants) Phylogenetic Tree(s): OG_05_0003602_tree ,
OG_06_0004810 (SeedPlants) Phylogenetic Tree(s): OG_06_0004810_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01022278001
Cluster	HCCA: Cluster_123

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00125090	evm_27.TU.AmTr_v1...	Ribonucleoside-diphosphate reductase large subunit...	0.03	Archaeplastida
AMTR_s00017p00232600	evm_27.TU.AmTr_v1...	Nucleotide metabolism.deoxynucleotide...	0.05	Archaeplastida
AT2G21790	CLS8, RNR1, ATRNR1, R1	ribonucleotide reductase 1	0.03	Archaeplastida
Cre12.g492950	No alias	Nucleotide metabolism.deoxynucleotide...	0.04	Archaeplastida
Gb_15263	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.17...	0.04	Archaeplastida
Gb_21933	No alias	large subunit of ribonucleoside-diphosphate reductase heterodimer	0.04	Archaeplastida
LOC_Os06g07210.1	No alias	large subunit of ribonucleoside-diphosphate reductase heterodimer	0.03	Archaeplastida
MA_10435382g0010	No alias	large subunit of ribonucleoside-diphosphate reductase heterodimer	0.03	Archaeplastida
Mp2g00850.1	No alias	large subunit of ribonucleoside-diphosphate reductase heterodimer	0.03	Archaeplastida
Solyc04g012060.3.1	No alias	large subunit of ribonucleoside-diphosphate reductase heterodimer	0.03	Archaeplastida
Solyc04g051350.3.1	No alias	large subunit of ribonucleoside-diphosphate reductase heterodimer	0.04	Archaeplastida
Zm00001e030111_P001	No alias	large subunit of ribonucleoside-diphosphate reductase heterodimer	0.02	Archaeplastida
Zm00001e036393_P001	No alias	large subunit of ribonucleoside-diphosphate reductase heterodimer	0.07	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0055114	oxidation-reduction process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0003682	chromatin binding	IEP	Neighborhood
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	Neighborhood
MF	GO:0003916	DNA topoisomerase activity	IEP	Neighborhood
MF	GO:0004797	thymidine kinase activity	IEP	Neighborhood
MF	GO:0005524	ATP binding	IEP	Neighborhood
CC	GO:0005694	chromosome	IEP	Neighborhood
BP	GO:0006265	DNA topological change	IEP	Neighborhood
BP	GO:0006270	DNA replication initiation	IEP	Neighborhood
BP	GO:0006996	organelle organization	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
MF	GO:0019136	deoxynucleoside kinase activity	IEP	Neighborhood
MF	GO:0019205	nucleobase-containing compound kinase activity	IEP	Neighborhood
MF	GO:0019206	nucleoside kinase activity	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
MF	GO:0034061	DNA polymerase activity	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
MF	GO:0036094	small molecule binding	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
BP	GO:0045454	cell redox homeostasis	IEP	Neighborhood
BP	GO:0051276	chromosome organization	IEP	Neighborhood
BP	GO:0071103	DNA conformation change	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR005144	ATP-cone_dom	1	89
IPR013509	RNR_lsu_N	142	212
IPR000788	RNR_lg_C	216	757

External Links

No external refs found!

GSVIVT01022278001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation