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  5. GSVIVT01022586001

GSVIVT01022586001


Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.YABBY transcription factor


Gene families : OG0000890 (Archaeplastida) Phylogenetic Tree(s): OG0000890_tree ,
OG_05_0002078 (LandPlants) Phylogenetic Tree(s): OG_05_0002078_tree ,
OG_06_0001123 (SeedPlants) Phylogenetic Tree(s): OG_06_0001123_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01022586001
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
AT1G23420 INO Plant-specific transcription factor YABBY family protein 0.03 Archaeplastida
MA_407206g0010 No alias transcription factor (YABBY) 0.03 Archaeplastida
Solyc01g091010.3.1 No alias transcription factor (YABBY) 0.05 Archaeplastida
Solyc11g071810.2.1 No alias transcription factor (YABBY) 0.05 Archaeplastida
Zm00001e012387_P001 No alias transcription factor (YABBY) 0.04 Archaeplastida
Zm00001e012388_P001 No alias transcription factor (YABBY) 0.04 Archaeplastida
Zm00001e015245_P002 No alias transcription factor (YABBY) 0.02 Archaeplastida
Zm00001e032845_P002 No alias transcription factor (YABBY) 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0007275 multicellular organism development IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004559 alpha-mannosidase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006013 mannose metabolic process IEP Neighborhood
BP GO:0006308 DNA catabolic process IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR006780 YABBY 6 156
No external refs found!