-0.32 -0.38 -0.29 -0.88 0.89 0.28 0.56 1.3 -0.21 -1.73 -0.43 -1.14 1.28 -1.65 -2.48 1.11 0.5 -0.83 -1.35 1.43 -0.37 -0.6 -0.14 -1.76 -2.35 -6.44 -1.41 -0.92 1.3 0.93 -3.6 0.27 0.81
AT1G52630
0.46 0.59 0.69 0.85 1.02 0.32 0.93 -1.64 -1.75 -3.72 -2.8 0.76 -2.63 0.34 -0.26 -0.27 0.45 0.34 -1.43 0.27 0.06 -0.16 0.24 -0.15 -1.36 -0.11 -0.57 0.36 -0.27 -1.46 0.2 -0.03 -0.73 -0.07 0.32 0.18 -0.16 0.11 -0.46 -4.21 -3.28 -0.11 0.87 0.64 0.48 1.23 - 0.28
AT1G54220
0.93 0.51 -0.07 0.36 0.56 0.37 0.53 -2.19 -2.88 -5.78 -4.88 -10.12 -4.79 0.54 0.36 -0.39 -0.44 0.65 -2.34 -0.13 0.53 -0.07 -0.31 0.5 -2.82 0.52 0.21 0.9 0.16 -4.46 0.66 -0.18 0.67 0.02 0.43 0.83 0.51 0.37 -1.03 -1.83 -1.52 -0.12 0.67 0.27 0.62 0.48 -1.27 0.48
AT1G55880
0.15 1.12 0.63 0.03 -0.1 -2.23 0.26 -2.6 -2.44 -3.29 -2.48 - -6.55 0.34 0.06 -0.06 -0.18 -0.45 -0.87 1.06 0.2 0.23 0.56 -0.05 -1.04 -0.23 -0.83 0.6 -0.5 -1.34 1.0 0.38 -0.43 0.03 0.75 -0.08 0.21 0.2 0.1 -1.92 -2.72 0.09 0.59 1.53 0.58 1.27 -1.62 0.25
AT1G60070
-0.03 0.44 0.02 0.08 0.12 0.23 0.23 -0.43 -1.3 -4.88 -4.11 -5.33 -4.17 0.34 -0.41 -0.31 0.38 0.57 -1.71 0.06 0.01 0.09 0.49 0.0 -4.37 -0.01 -1.59 0.39 0.15 -5.52 0.12 -0.02 -0.42 0.23 -0.09 0.69 -0.7 0.19 -1.2 -2.44 -3.17 0.06 1.53 0.69 1.18 2.34 -3.94 0.67
AT1G61980
0.64 0.84 1.96 1.98 1.41 -0.18 1.75 -4.96 -4.84 -5.84 -4.42 -10.77 -7.48 0.22 0.34 -0.44 -0.67 0.01 -0.91 0.39 0.43 -0.14 0.24 -0.34 -1.48 -0.65 -1.16 0.75 -0.49 -1.48 0.89 0.2 -0.71 -0.69 0.84 -0.97 -0.34 -0.12 -0.31 -5.51 -2.7 -0.97 -0.9 0.96 -0.21 - -3.94 0.63
AT1G69020
1.52 0.92 1.08 1.43 1.24 -0.3 1.39 -2.97 -2.07 -2.34 -2.86 -4.61 -3.41 0.24 0.41 -0.25 -0.79 -0.47 -1.43 0.51 -1.29 0.2 0.71 -0.03 -2.19 0.16 -0.47 0.33 0.16 -2.67 0.72 -0.4 -0.82 -0.69 0.01 -0.2 0.59 -0.19 -0.22 -1.6 -1.0 -1.46 0.49 1.39 0.34 - -2.85 0.35
AT1G71440 (PFI)
0.82 0.42 0.57 0.42 0.25 0.04 0.42 -1.61 -2.83 -4.49 -4.55 - -3.6 0.04 0.28 -0.12 0.16 -0.22 -0.87 0.74 0.44 0.18 0.76 -0.08 -2.71 -0.17 -0.89 0.54 0.19 -3.97 0.67 0.26 -0.68 -0.58 0.37 0.43 -0.64 -0.05 -1.06 -1.59 -1.49 -0.38 0.48 0.9 0.69 1.67 0.51 0.5
AT1G75140
0.7 1.29 -1.71 -2.1 -2.56 -4.04 -2.21 -5.6 -5.62 -6.87 -5.12 -3.73 -6.58 0.38 0.79 0.1 0.16 0.83 -0.73 1.05 0.49 0.31 0.65 -0.12 -1.42 -0.35 -1.16 0.69 -0.28 -1.83 1.16 -0.21 -0.59 -0.1 0.88 -0.54 1.06 0.26 -0.2 -7.47 -9.12 -1.18 0.78 0.93 1.19 1.87 -1.17 0.85
AT1G76280
0.45 0.75 1.77 1.68 1.21 -0.09 1.45 -1.57 -2.48 -5.27 -3.85 -6.56 -1.76 0.26 0.6 -0.13 -0.59 -0.73 -1.66 0.44 -0.09 0.4 0.8 -0.73 -1.14 -0.72 -0.98 0.75 0.5 -1.1 -0.02 0.44 -0.25 -0.52 -0.05 -0.82 -0.64 -0.24 -0.54 -3.94 -0.57 -1.31 -0.11 1.17 0.13 -0.94 -2.33 0.48
AT1G78810
0.43 0.15 1.04 0.99 0.86 0.75 0.83 0.44 -0.85 -2.27 -2.28 -7.83 -1.61 -0.06 0.88 -0.16 0.24 -0.36 -0.54 0.34 0.2 0.08 0.75 -0.37 -1.86 -0.32 0.08 0.53 -0.06 -2.87 -0.4 0.28 -0.53 -0.46 0.81 0.28 -0.29 -0.06 -0.7 -2.04 -0.1 -0.07 0.44 0.72 0.52 -7.25 -2.09 0.11
AT2G02765
-0.78 1.88 0.9 0.57 0.61 0.56 0.63 -2.58 -2.17 -5.22 -3.61 -4.1 -4.09 0.69 0.55 0.46 -0.15 -1.3 -1.68 1.67 0.22 0.73 0.82 -0.16 -2.03 0.17 -0.71 0.21 -3.82 -1.69 0.47 -0.24 -0.33 -0.04 -0.03 0.08 0.12 0.83 -0.31 -3.05 - -0.71 0.82 1.48 -0.56 - -2.25 0.15
AT2G18330
1.38 0.35 2.29 1.79 1.59 -0.61 1.47 -4.93 -5.58 -5.43 -4.96 -11.08 -8.04 -0.45 -0.41 -1.24 -1.31 -1.27 -1.02 0.57 -0.16 -0.1 0.79 -0.92 -1.66 -1.91 -2.87 1.34 -0.18 -1.68 0.59 0.49 -0.99 -1.56 1.05 -1.48 -1.82 -0.44 -2.38 -4.39 -3.27 -1.52 -0.67 1.51 0.61 -4.84 -0.0 1.06
AT2G22100
1.1 0.38 2.29 2.11 1.81 0.64 1.78 -2.48 -2.98 -4.81 -4.35 -6.77 -3.59 -0.5 0.46 -1.04 -1.21 -0.87 -0.89 0.17 -0.51 -0.6 0.48 -0.65 -1.84 -1.07 -0.79 0.46 0.64 -2.32 0.68 0.51 -0.78 -0.95 0.81 -1.39 -0.97 -0.73 -1.66 -5.1 -7.15 -1.05 -1.14 0.66 0.33 -3.08 -2.65 0.61
AT2G32840
-0.92 1.33 0.37 0.88 0.1 -0.48 0.68 -2.15 -2.7 -4.98 -5.76 -3.01 -2.07 0.07 0.15 -0.12 0.49 -0.13 -0.5 0.98 0.9 -0.07 0.51 0.06 -0.59 -0.42 -0.6 0.97 -0.87 -0.74 1.05 0.12 -0.43 -0.5 0.74 -0.3 -0.33 0.03 -0.93 -5.68 -5.56 -0.34 0.15 0.7 -0.4 0.88 1.39 -0.16
AT2G34355
-1.78 -0.86 1.04 1.28 0.48 -2.25 1.12 -9.34 -7.09 -5.98 -6.85 -9.63 -4.01 -1.32 -1.26 -1.34 -0.53 -0.7 -1.4 -0.69 -1.68 -1.41 -1.17 -0.11 1.87 -1.37 -3.59 -0.77 0.98 2.27 -0.42 -0.58 -0.96 0.08 -0.45 0.13 -1.54 -0.41 -1.22 0.58 2.55 0.82 0.98 -1.39 0.01 - 1.01 -0.17
AT2G38960 (ERO2)
0.32 0.36 0.5 0.36 0.18 -0.04 -0.08 -0.98 -2.29 -4.45 -4.04 - -1.9 0.15 0.0 -0.71 0.09 0.06 -1.35 0.49 0.05 -0.49 0.0 -0.45 -0.75 -0.68 -1.23 -0.14 0.27 -1.76 0.52 0.61 -0.52 -0.12 0.38 -0.36 -0.09 0.1 -0.7 -3.1 -1.05 -0.03 1.21 0.6 1.11 2.64 -3.91 0.38
AT2G44150 (SDG7)
-3.5 0.69 -2.97 -2.61 -2.47 -1.87 -2.36 -2.75 -2.62 -4.38 -3.41 -0.77 -7.14 0.6 0.64 0.31 0.86 0.24 -0.99 1.03 0.02 0.37 0.65 0.29 -3.11 0.41 -1.94 1.13 -1.46 -3.91 0.36 0.14 -0.1 0.37 0.78 0.31 -0.02 0.28 -0.14 -4.47 0.43 -0.05 0.78 0.88 0.22 2.5 -0.78 0.06
AT2G44530
0.32 0.81 -0.11 -0.86 -0.92 -3.81 -1.14 -5.27 -3.81 -5.33 -3.9 -1.11 -3.22 0.45 -0.6 -0.02 0.24 0.17 -0.46 0.96 0.18 0.5 0.64 0.28 -0.41 0.29 0.08 1.06 -0.47 -0.53 0.84 0.15 -0.2 0.12 0.66 0.59 1.17 0.6 0.58 -1.65 -3.05 0.18 0.25 0.93 0.08 -1.03 0.47 0.08
AT2G45690 (SSE)
0.35 0.48 1.06 1.32 0.91 0.58 1.32 -0.61 -0.77 -1.34 -1.12 - -0.76 0.06 0.36 -0.23 -0.24 -0.43 -0.77 0.17 -0.08 -0.37 -0.03 -0.46 -0.22 -0.51 0.52 0.07 -1.08 -0.29 -0.24 0.75 -0.67 -0.45 -0.43 -0.64 0.81 0.07 -0.14 -7.35 -1.94 0.06 -0.34 0.71 -0.49 -3.66 1.39 -0.31
AT3G06140
-0.95 1.01 0.33 0.06 0.19 -0.29 0.14 -2.87 -2.81 -6.18 -6.56 -5.77 -6.31 0.41 -0.53 -0.22 -0.01 -0.2 -1.51 1.09 1.93 0.08 0.2 0.22 -6.15 0.06 -6.69 -0.29 -1.05 -5.66 0.87 -0.41 -0.22 -0.43 0.52 0.76 -3.31 -0.22 -2.55 -1.43 -7.97 -1.44 0.22 -0.57 -0.13 3.38 -8.43 -0.68
AT3G10220
-0.25 0.73 0.58 0.53 0.39 -0.22 0.47 -2.78 -3.73 -4.58 -5.4 - -8.44 0.15 0.13 -0.56 -0.16 -0.3 -1.53 0.7 0.09 -0.14 0.52 -0.16 -1.06 -0.43 -1.34 0.56 -0.35 -0.83 0.51 0.03 -0.87 -0.04 0.55 -0.05 -0.1 0.22 -0.17 -2.56 -6.25 -0.22 1.11 1.59 0.81 1.64 0.34 0.77
AT3G12070 (RGTB2)
0.9 0.92 2.15 2.28 1.61 -0.27 2.02 -6.78 -4.11 -5.92 -4.57 - - 0.18 -1.17 -1.76 -2.05 -2.74 -1.49 0.46 -0.65 -2.03 -1.04 -0.83 -0.95 -1.31 0.35 0.28 0.82 -0.66 0.89 0.07 -1.64 -1.44 0.32 -0.79 0.6 -0.35 0.11 -3.95 -1.22 -1.07 -0.52 1.34 -0.07 - -10.2 0.29
AT3G12100
1.86 0.53 0.79 0.9 1.09 0.43 0.68 -2.64 -3.08 -5.19 -4.95 -5.88 -3.8 0.19 -0.54 0.12 0.11 -0.84 -2.27 0.35 -0.06 -0.05 0.3 -0.46 -1.9 -0.19 -0.16 -0.46 -0.08 -2.04 -0.29 -0.52 -0.65 -0.34 -0.64 0.36 0.65 0.21 0.52 -2.75 -1.05 1.01 0.95 0.83 -0.22 1.15 -1.5 0.17
AT3G13860 (HSP60-3A)
1.23 -0.07 1.69 1.61 0.99 -1.23 1.34 -7.31 -6.05 -5.75 -5.19 -9.93 -2.71 -0.16 -0.55 -0.93 -0.89 -0.64 -1.04 0.38 -0.22 0.18 0.99 -0.62 -1.57 -1.19 -2.31 1.06 0.21 -2.01 0.57 0.82 -0.94 -1.66 0.86 -0.52 -0.32 -0.14 -2.19 -1.87 -1.06 -1.69 -0.59 1.88 0.93 -5.43 -0.65 1.38
AT3G15200
0.89 -0.51 0.47 0.43 0.47 -1.41 -0.64 - -7.61 -5.93 -5.0 -6.48 -7.97 0.39 0.44 -0.47 -1.88 -2.39 -1.59 0.04 -1.34 -0.67 -0.01 -0.97 -1.05 -1.3 -2.41 0.69 1.45 -0.93 -0.25 0.13 -0.0 0.28 0.25 0.57 1.55 -0.21 0.53 2.55 0.23 0.18 -1.17 -0.11 -0.83 1.74 -0.64 -1.28
AT3G15410
0.13 0.37 -0.07 -0.04 0.35 0.58 0.07 0.16 -0.43 -1.13 -0.83 -9.67 -2.21 -0.08 -0.29 -0.63 0.33 0.52 -0.67 0.39 0.19 -0.22 0.33 -0.16 -2.99 -0.27 -1.5 -0.39 -1.35 -3.52 -0.1 -0.39 -0.87 0.01 0.08 0.58 -0.78 0.06 -1.33 -1.7 -1.88 -0.16 1.11 0.32 0.63 2.65 0.38 0.29
AT3G16090
1.38 0.58 -0.54 -0.54 -0.2 -0.09 -0.9 -1.34 -1.98 -4.54 -3.77 -2.35 -1.98 0.21 -0.57 -0.38 0.5 0.32 -1.16 0.48 0.33 -0.55 -0.07 -0.23 -1.84 -0.31 0.25 0.53 -0.55 -2.02 0.09 -0.15 -0.52 0.26 -0.32 0.05 -0.02 0.09 0.25 -3.31 -1.9 0.79 0.96 0.42 0.33 2.42 0.69 -0.09
AT3G26950
0.6 0.56 -0.36 -0.37 0.3 0.48 0.08 -0.54 -0.94 -2.84 -1.75 -2.04 -1.23 0.37 -0.11 -0.06 1.3 0.46 -1.2 0.45 0.44 0.61 1.05 0.61 -0.35 0.71 -0.51 -0.09 -0.76 -0.25 0.27 0.14 -0.16 0.07 0.36 0.74 -0.27 0.23 -1.09 -3.04 -7.21 0.23 0.56 0.53 0.27 -1.15 -2.9 -0.1
AT3G29090 (PME31)
0.22 0.66 0.92 0.86 0.53 -1.38 0.56 -7.17 -4.89 -5.57 -4.81 -2.17 -6.55 0.26 0.44 -0.18 -0.75 -0.84 -0.86 0.66 0.12 0.09 0.5 -0.17 1.22 -0.42 0.02 -0.05 2.06 1.58 0.31 -0.01 -0.3 -0.46 0.33 -0.42 0.6 0.14 -0.34 -1.81 -1.1 -0.5 -1.21 -0.34 -1.06 -7.81 0.77 -1.1
AT3G47930 (GLDH)
1.33 0.36 GSVIVT01022591001 details
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  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01022591001

GSVIVT01022591001


Description : Vesicle trafficking.target membrane tethering.TRAPP (Trafficking-Protein-Particle) complexes.TRAPP-III complex-specific components.TRS85 component


Gene families : OG0003624 (Archaeplastida) Phylogenetic Tree(s): OG0003624_tree ,
OG_05_0004056 (LandPlants) Phylogenetic Tree(s): OG_05_0004056_tree ,
OG_06_0006642 (SeedPlants) Phylogenetic Tree(s): OG_06_0006642_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01022591001
Cluster HCCA: Cluster_220

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00037130 evm_27.TU.AmTr_v1... Vesicle trafficking.target membrane tethering.TRAPP... 0.05 Archaeplastida
AT5G16280 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.16 Archaeplastida
Cpa|evm.model.tig00000767.25 No alias Vesicle trafficking.target membrane tethering.TRAPP... 0.03 Archaeplastida
Gb_19012 No alias component TRS85 of TRAPP-III complex-specific components 0.06 Archaeplastida
LOC_Os03g57300.1 No alias component TRS85 of TRAPP-III complex-specific components 0.03 Archaeplastida
MA_10429872g0010 No alias No annotation 0.02 Archaeplastida
MA_186117g0010 No alias component TRS85 of TRAPP-III complex-specific components 0.02 Archaeplastida
Mp6g07480.1 No alias component TRS85 of TRAPP-III complex-specific components 0.12 Archaeplastida
Pp3c6_8810V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.06 Archaeplastida
Smo113725 No alias Vesicle trafficking.target membrane tethering.TRAPP... 0.08 Archaeplastida
Solyc01g006960.3.1 No alias component TRS85 of TRAPP-III complex-specific components 0.17 Archaeplastida
Zm00001e005920_P002 No alias component TRS85 of TRAPP-III complex-specific components 0.14 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005801 cis-Golgi network IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
BP GO:0016482 cytosolic transport IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
CC GO:0030173 integral component of Golgi membrane IEP Neighborhood
CC GO:0030906 retromer, cargo-selective complex IEP Neighborhood
CC GO:0031228 intrinsic component of Golgi membrane IEP Neighborhood
CC GO:0031300 intrinsic component of organelle membrane IEP Neighborhood
CC GO:0031301 integral component of organelle membrane IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0042147 retrograde transport, endosome to Golgi IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
InterPro domains Description Start Stop
IPR013935 TRAPP_II_complex_Trs120 616 813
IPR024420 TRAPP_III_complex_Trs85 166 498
No external refs found!