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  5. AMTR_s00041p00110880

AMTR_s00041p00110880 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00041.77

Description : Protein yippee-like At4g27745 OS=Arabidopsis thaliana


Gene families : OG0000470 (Archaeplastida) Phylogenetic Tree(s): OG0000470_tree ,
OG_05_0001837 (LandPlants) Phylogenetic Tree(s): OG_05_0001837_tree ,
OG_06_0003884 (SeedPlants) Phylogenetic Tree(s): OG_06_0003884_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00041p00110880
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01032841001 No alias Protein yippee-like OS=Solanum tuberosum 0.03 Archaeplastida
LOC_Os10g22410.1 No alias Putative yippee-like protein Os10g0369500 OS=Oryza... 0.03 Archaeplastida
Solyc12g013920.2.1 No alias Protein yippee-like At5g53940 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003995 acyl-CoA dehydrogenase activity IEP Neighborhood
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006450 regulation of translational fidelity IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0019321 pentose metabolic process IEP Neighborhood
BP GO:0019566 arabinose metabolic process IEP Neighborhood
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
BP GO:0046373 L-arabinose metabolic process IEP Neighborhood
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
InterPro domains Description Start Stop
IPR004910 Yippee/Mis18/Cereblon 6 103
No external refs found!