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Description : Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin establishment.PDS5 cohesin cofactor
Gene families : OG0000410 (Archaeplastida) Phylogenetic Tree(s): OG0000410_tree ,
OG_05_0001049 (LandPlants) Phylogenetic Tree(s): OG_05_0001049_tree ,
OG_06_0000558 (SeedPlants) Phylogenetic Tree(s): OG_06_0000558_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01023587001 | |
| Cluster | HCCA: Cluster_238 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00017p00192140 | evm_27.TU.AmTr_v1... | Cell cycle.mitosis and meiosis.sister chromatid... | 0.05 | Archaeplastida | |
| AMTR_s00061p00213120 | evm_27.TU.AmTr_v1... | Cell cycle.mitosis and meiosis.sister chromatid... | 0.05 | Archaeplastida | |
| AMTR_s00065p00174980 | evm_27.TU.AmTr_v1... | Cell cycle.mitosis and meiosis.sister chromatid... | 0.03 | Archaeplastida | |
| AT1G77600 | No alias | ARM repeat superfamily protein | 0.03 | Archaeplastida | |
| AT4G31880 | No alias | LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant... | 0.04 | Archaeplastida | |
| AT5G47690 | No alias | binding | 0.05 | Archaeplastida | |
| Cpa|evm.model.tig00000076.96 | No alias | No description available | 0.02 | Archaeplastida | |
| Gb_02487 | No alias | cohesin cofactor (PDS5) | 0.03 | Archaeplastida | |
| Gb_23673 | No alias | cohesin cofactor (PDS5) | 0.02 | Archaeplastida | |
| MA_10093130g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| MA_10426926g0010 | No alias | cohesin cofactor (PDS5) | 0.02 | Archaeplastida | |
| MA_10433886g0010 | No alias | cohesin cofactor (PDS5) | 0.04 | Archaeplastida | |
| MA_10434055g0010 | No alias | cohesin cofactor (PDS5) | 0.02 | Archaeplastida | |
| MA_10434304g0010 | No alias | cohesin cofactor (PDS5) | 0.03 | Archaeplastida | |
| MA_25261g0010 | No alias | no hits & (original description: none) | 0.07 | Archaeplastida | |
| MA_523g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Pp3c10_24900V3.1 | No alias | binding | 0.04 | Archaeplastida | |
| Pp3c23_10270V3.1 | No alias | binding | 0.03 | Archaeplastida | |
| Solyc03g116940.3.1 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| Solyc06g065710.3.1 | No alias | cohesin cofactor (PDS5) | 0.04 | Archaeplastida | |
| Solyc11g012770.2.1 | No alias | cohesin cofactor (PDS5) | 0.04 | Archaeplastida | |
| Zm00001e015094_P002 | No alias | cohesin cofactor (PDS5) | 0.05 | Archaeplastida | |
| Zm00001e019139_P001 | No alias | cohesin cofactor (PDS5) | 0.03 | Archaeplastida | |
| Zm00001e019144_P001 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Zm00001e022962_P003 | No alias | cohesin cofactor (PDS5) | 0.02 | Archaeplastida | |
| Zm00001e030989_P001 | No alias | cohesin cofactor (PDS5) | 0.07 | Archaeplastida | |
| Zm00001e036853_P003 | No alias | cohesin cofactor (PDS5) | 0.06 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0002097 | tRNA wobble base modification | IEP | Neighborhood |
| BP | GO:0002100 | tRNA wobble adenosine to inosine editing | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0003678 | DNA helicase activity | IEP | Neighborhood |
| MF | GO:0004000 | adenosine deaminase activity | IEP | Neighborhood |
| MF | GO:0004003 | ATP-dependent DNA helicase activity | IEP | Neighborhood |
| MF | GO:0004386 | helicase activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
| BP | GO:0006281 | DNA repair | IEP | Neighborhood |
| BP | GO:0006382 | adenosine to inosine editing | IEP | Neighborhood |
| BP | GO:0006400 | tRNA modification | IEP | Neighborhood |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Neighborhood |
| MF | GO:0008026 | ATP-dependent helicase activity | IEP | Neighborhood |
| MF | GO:0008094 | DNA-dependent ATPase activity | IEP | Neighborhood |
| MF | GO:0008251 | tRNA-specific adenosine deaminase activity | IEP | Neighborhood |
| BP | GO:0016553 | base conversion or substitution editing | IEP | Neighborhood |
| BP | GO:0016579 | protein deubiquitination | IEP | Neighborhood |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Neighborhood |
| MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Neighborhood |
| MF | GO:0019239 | deaminase activity | IEP | Neighborhood |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | Neighborhood |
| BP | GO:0033554 | cellular response to stress | IEP | Neighborhood |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | Neighborhood |
| BP | GO:0051716 | cellular response to stimulus | IEP | Neighborhood |
| MF | GO:0070035 | purine NTP-dependent helicase activity | IEP | Neighborhood |
| BP | GO:0070646 | protein modification by small protein removal | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |