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  5. AT1G04770

AT1G04770


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG0000793 (Archaeplastida) Phylogenetic Tree(s): OG0000793_tree ,
OG_05_0000711 (LandPlants) Phylogenetic Tree(s): OG_05_0000711_tree ,
OG_06_0000780 (SeedPlants) Phylogenetic Tree(s): OG_06_0000780_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G04770
Cluster HCCA: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01011343001 No alias Cell cycle.mitosis and meiosis.meiotic... 0.04 Archaeplastida
GSVIVT01028569001 No alias Cell cycle.mitosis and meiosis.meiotic... 0.1 Archaeplastida
LOC_Os05g43040.1 No alias Protein SULFUR DEFICIENCY-INDUCED 2 OS=Arabidopsis... 0.06 Archaeplastida
MA_10425911g0010 No alias Protein POLLENLESS 3-LIKE 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10429050g0010 No alias Protein POLLENLESS 3-LIKE 2 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_3682g0010 No alias Protein POLLENLESS 3-LIKE 2 OS=Arabidopsis thaliana... 0.06 Archaeplastida
MA_8881560g0010 No alias Protein POLLENLESS 3-LIKE 2 OS=Arabidopsis thaliana... 0.07 Archaeplastida
MA_9754375g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc06g007970.3.1 No alias Protein SULFUR DEFICIENCY-INDUCED 1 OS=Arabidopsis... 0.06 Archaeplastida
Solyc09g061700.3.1 No alias Protein SULFUR DEFICIENCY-INDUCED 1 OS=Arabidopsis... 0.04 Archaeplastida
Solyc09g091600.4.1 No alias Protein SULFUR DEFICIENCY-INDUCED 2 OS=Arabidopsis... 0.1 Archaeplastida
Zm00001e039019_P001 No alias Protein SULFUR DEFICIENCY-INDUCED 1 OS=Arabidopsis... 0.05 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0009658 chloroplast organization IMP Interproscan
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Type GO Term Name Evidence Source
BP GO:0000103 sulfate assimilation IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003724 RNA helicase activity IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003933 GTP cyclohydrolase activity IEP Neighborhood
MF GO:0003934 GTP cyclohydrolase I activity IEP Neighborhood
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Neighborhood
MF GO:0004620 phospholipase activity IEP Neighborhood
MF GO:0004629 phospholipase C activity IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
CC GO:0005615 extracellular space IEP Neighborhood
CC GO:0005635 nuclear envelope IEP Neighborhood
BP GO:0006405 RNA export from nucleus IEP Neighborhood
BP GO:0006406 mRNA export from nucleus IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
MF GO:0008186 RNA-dependent ATPase activity IEP Neighborhood
BP GO:0008284 positive regulation of cell proliferation IEP Neighborhood
BP GO:0009410 response to xenobiotic stimulus IEP Neighborhood
BP GO:0009820 alkaloid metabolic process IEP Neighborhood
BP GO:0009821 alkaloid biosynthetic process IEP Neighborhood
MF GO:0009973 adenylyl-sulfate reductase activity IEP Neighborhood
BP GO:0010119 regulation of stomatal movement IEP Neighborhood
BP GO:0010288 response to lead ion IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP Neighborhood
MF GO:0019238 cyclohydrolase activity IEP Neighborhood
BP GO:0019321 pentose metabolic process IEP Neighborhood
BP GO:0019419 sulfate reduction IEP Neighborhood
BP GO:0022622 root system development IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
BP GO:0032880 regulation of protein localization IEP Neighborhood
BP GO:0042732 D-xylose metabolic process IEP Neighborhood
CC GO:0044421 extracellular region part IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
BP GO:0048527 lateral root development IEP Neighborhood
BP GO:0050657 nucleic acid transport IEP Neighborhood
BP GO:0050658 RNA transport IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051028 mRNA transport IEP Neighborhood
BP GO:0051168 nuclear export IEP Neighborhood
BP GO:0051236 establishment of RNA localization IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0051645 Golgi localization IEP Neighborhood
BP GO:0051646 mitochondrion localization IEP Neighborhood
BP GO:0060151 peroxisome localization IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
InterPro domains Description Start Stop
IPR019734 TPR_repeat 161 192
No external refs found!