GSVIVT01023697001

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.AP2-type transcription factor

Gene families : OG0000068 (Archaeplastida) Phylogenetic Tree(s): OG0000068_tree ,
OG_05_0000090 (LandPlants) Phylogenetic Tree(s): OG_05_0000090_tree ,
OG_06_0000054 (SeedPlants) Phylogenetic Tree(s): OG_06_0000054_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01023697001
Cluster	HCCA: Cluster_10

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00225230	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
AMTR_s00024p00227390	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00058p00216470	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00065p00077750	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00101p00022740	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AT1G72570	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT4G36920	AP2, FLO2, FL1	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
GSVIVT01016764001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01025307001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
Gb_18139	No alias	transcription factor (AP2)	0.1	Archaeplastida
Gb_39931	No alias	transcription factor (AP2)	0.04	Archaeplastida
Gb_41702	No alias	transcription factor (AP2)	0.04	Archaeplastida
LOC_Os01g67410.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
LOC_Os02g40070.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
LOC_Os03g07940.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
LOC_Os03g19900.1	No alias	transcription factor (AP2)	0.02	Archaeplastida
LOC_Os06g05340.1	No alias	transcription factor (AP2). RAM1-dependent transcription...	0.08	Archaeplastida
LOC_Os06g43220.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
LOC_Os06g44750.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
LOC_Os07g39110.2	No alias	no hits & (original description: none)	0.04	Archaeplastida
LOC_Os11g19060.1	No alias	transcription factor (AP2)	0.04	Archaeplastida
LOC_Os12g03290.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
MA_10005612g0010	No alias	no hits & (original description: none)	0.07	Archaeplastida
MA_121578g0010	No alias	transcription factor (AP2)	0.02	Archaeplastida
MA_2193g0020	No alias	transcription factor (AP2)	0.03	Archaeplastida
MA_30905g0010	No alias	transcription factor (AP2)	0.03	Archaeplastida
MA_639835g0010	No alias	no hits & (original description: none)	0.08	Archaeplastida
MA_8090186g0010	No alias	transcription factor (AP2)	0.06	Archaeplastida
MA_86195g0010	No alias	transcription factor (AP2)	0.03	Archaeplastida
MA_95471g0010	No alias	transcription factor (AP2)	0.08	Archaeplastida
Mp7g13270.1	No alias	transcription factor (AP2)	0.03	Archaeplastida
Pp3c10_24550V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c15_4400V3.1	No alias	target of early activation tagged (EAT) 2	0.03	Archaeplastida
Pp3c23_13360V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c9_25400V3.1	No alias	AINTEGUMENTA-like 5	0.06	Archaeplastida
Solyc01g096860.3.1	No alias	transcription factor (AP2)	0.05	Archaeplastida
Solyc03g117720.3.1	No alias	transcription factor (AP2)	0.04	Archaeplastida
Solyc11g008560.2.1	No alias	transcription factor (AP2)	0.05	Archaeplastida
Solyc11g061750.2.1	No alias	transcription factor (AP2)	0.04	Archaeplastida
Zm00001e000558_P003	No alias	transcription factor (AP2)	0.07	Archaeplastida
Zm00001e006752_P001	No alias	transcription factor (AP2)	0.03	Archaeplastida
Zm00001e009225_P003	No alias	transcription factor (AP2)	0.04	Archaeplastida
Zm00001e018951_P001	No alias	transcription factor (AP2)	0.03	Archaeplastida
Zm00001e024044_P002	No alias	transcription factor (AP2)	0.03	Archaeplastida
Zm00001e027593_P003	No alias	transcription factor (AP2)	0.03	Archaeplastida
Zm00001e034197_P002	No alias	transcription factor (AP2)	0.04	Archaeplastida
Zm00001e037501_P005	No alias	transcription factor (AP2)	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003871	5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0004650	polygalacturonase activity	IEP	Neighborhood
MF	GO:0005507	copper ion binding	IEP	Neighborhood
MF	GO:0008172	S-methyltransferase activity	IEP	Neighborhood
MF	GO:0009055	electron transfer activity	IEP	Neighborhood
BP	GO:0009690	cytokinin metabolic process	IEP	Neighborhood
BP	GO:0010817	regulation of hormone levels	IEP	Neighborhood
MF	GO:0015267	channel activity	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
BP	GO:0016053	organic acid biosynthetic process	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
MF	GO:0019139	cytokinin dehydrogenase activity	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0022803	passive transmembrane transporter activity	IEP	Neighborhood
BP	GO:0034754	cellular hormone metabolic process	IEP	Neighborhood
MF	GO:0042085	5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity	IEP	Neighborhood
BP	GO:0042445	hormone metabolic process	IEP	Neighborhood
MF	GO:0045735	nutrient reservoir activity	IEP	Neighborhood
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	45	103
IPR001471	AP2/ERF_dom	146	197

External Links

No external refs found!

GSVIVT01023697001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation