AMTR_s00041p00160040 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00041.113

No description available

Gene families : OG0001243 (Archaeplastida) Phylogenetic Tree(s): OG0001243_tree ,
OG_05_0000962 (LandPlants) Phylogenetic Tree(s): OG_05_0000962_tree ,
OG_06_0004439 (SeedPlants) Phylogenetic Tree(s): OG_06_0004439_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00041p00160040
Cluster	HCCA: Cluster_96

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os03g10440.1	No alias	no description available(sp\|a0a1p8b8f8\|xyn5_arath : 380.0)	0.04	Archaeplastida
LOC_Os03g10469.1	No alias	no description available(sp\|q680b7\|xyn4_arath : 358.0)	0.03	Archaeplastida
MA_604666g0010	No alias	No annotation	0.04	Archaeplastida
Zm00001e000757_P001	No alias	no description available(sp\|q84wt5\|xyn5l_arath : 397.0)	0.02	Archaeplastida
Zm00001e038773_P006	No alias	no description available(sp\|q84wt5\|xyn5l_arath : 388.0)	0.03	Archaeplastida
Zm00001e040632_P001	No alias	no description available(sp\|q680b7\|xyn4_arath : 318.0)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
MF	GO:0010333	terpene synthase activity	IEP	Neighborhood
MF	GO:0016829	lyase activity	IEP	Neighborhood
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Neighborhood
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Neighborhood
BP	GO:0043086	negative regulation of catalytic activity	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
BP	GO:0044092	negative regulation of molecular function	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001000	GH10	201	460

External Links

No external refs found!